myRT

myRT report for GCA_902760685.1_Rumen_uncultured_genome_RUG10592

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Seq: CACWHQ010000072.1 (7007 bp)
Overview 1 RT 1: 1-4072 bp Neighborhood of RT #1 [1, 4116] RVT-DGRs RVT-DGRs RT_DIRS1 Flg_new Flg_new Flg_new B_ant_repeat exp_by_SipW_IV exp_by_SipW_IV Feature: gene Location: 1-525 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 238-517 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 238-51 7 bp Feature: gene Location: 509-1495 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 524-887 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 524-887 bp Feature: domain Description: RT_DIRS1 Location: 1160-1271 bp Feature: domain Description: RT_DIRS1 Location: 1 1 60-1 271 bp Feature: gene Location: 1482-3515 bp Feature: domain Description: Flg_new Location: 2127-2325 bp Feature: domain Description: Flg_new Location: 21 27-2325 bp Feature: domain Description: Flg_new Location: 2361-2565 bp Feature: domain Description: Flg_new Location: 2361 -2565 bp Feature: domain Description: Flg_new Location: 2589-2754 bp Feature: domain Description: Flg_new Location: 2589-2754 bp Feature: domain Description: B_ant_repeat Location: 2841-2931 bp Feature: domain Description: B_ant_repeat Location: 2841 -2931 bp Feature: gene Location: 3517-4116 bp Feature: domain Description: exp_by_SipW_IV Location: 3541-3964 bp Feature: domain Description: exp_by_SipW_IV Location: 3541 -3964 bp Feature: domain Description: exp_by_SipW_IV Location: 3991-4072 bp Feature: domain Description: exp_by_SipW_IV Location: 3991 -4072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RT_DIRS1 (cd03714), Flg_new (pfam09479), B_ant_repeat (TIGR01451), exp_by_SipW_IV (TIGR04090)

Seq: CACWHQ010000143.1 (3021 bp)
Overview 1 RT 1: 108-2897 bp Neighborhood of RT #1 [108, 2897] RAYT RVT-UG2 Feature: gene Location: 108-608 bp Feature: domain Description: RAYT Location: 162-543 bp Feature: domain Description: RAYT Location: 162 -543 bp Feature: gene Location: 851-1867 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 857-1568 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 857-1568 bp Feature: gene Location: 2015-2161 bp Feature: gene Location: 2214-2897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-UG2

Seq: CACWHQ010000089.1 (3739 bp)
Overview 1 RT 1: 115-3344 bp Neighborhood of RT #1 [115, 3514] COG3464 Avd_like RVT-DGRs MutS_I Feature: gene Location: 115-1404 bp Feature: domain Description: COG3464 Location: 136-1372 bp Feature: domain Description: COG3 464 Location: 13 6-13 72 bp Feature: gene Location: 1572-2012 bp Feature: domain Description: Avd_like Location: 1692-1983 bp Feature: domain Description: Avd_like Location: 1692-1983 bp Feature: gene Location: 2044-3108 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2197-2905 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2197-2905 bp Feature: gene Location: 3128-3514 bp Feature: domain Description: MutS_I Location: 3134-3344 bp Feature: domain Description: MutS_I Location: 3 13 4-3 3 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), Avd_like (cd16376), RVT-DGRs, MutS_I (pfam01624)