myRT

myRT report for GCA_902761645.1_Rumen_uncultured_genome_RUG10681

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Seq: CACWLF010000055.1 (13356 bp)
Overview 1 RT 1: 8093-12972 bp Neighborhood of RT #1 [8093, 12972] Tar RVT-GII RVT-GII GIIM PRK05439 Feature: gene Location: 8093-9718 bp Feature: domain Description: Tar Location: 8501-9659 bp Feature: domain Description: Tar Location: 8501 -9659 bp Feature: gene Location: 9825-10181 bp Feature: gene Location: 10275-10886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10500-10878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0500-1 0878 bp Feature: gene Location: 10919-11596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10943-11120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0943-1 1 1 20 bp Feature: domain Description: GIIM Note: maturase Location: 11216-11423 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 21 6-1 1 423 bp Feature: gene Location: 11702-12658 bp Feature: domain Description: PRK05439 Location: 11729-12656 bp Feature: domain Description: PRK05439 Location: 1 1 729-1 2656 bp Feature: gene Location: 12829-12972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tar (COG0840), RVT-GII, GIIM (pfam08388), PRK05439 (pantothenate kinase; Provisional)

Seq: CACWLF010000068.1 (18310 bp)
Overview 1 RT 1: 4242-9393 bp Neighborhood of RT #1 [4242, 9393] PRK05912 RVT-GII GIIM NrnA Feature: gene Location: 4242-5465 bp Feature: domain Description: PRK05912 Location: 4272-5457 bp Feature: domain Description: PRK05912 Location: 42 72 -5457 bp Feature: gene Location: 5646-5951 bp Feature: gene Location: 6097-7251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6322-6943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632 2 -6943 bp Feature: domain Description: GIIM Note: maturase Location: 7033-7204 bp Feature: domain Description: GIIM Note: maturase Location: 7033-72 04 bp Feature: gene Location: 7474-9033 bp Feature: domain Description: NrnA Location: 7495-8395 bp Feature: domain Description: NrnA Location: 7495-8395 bp Feature: gene Location: 9166-9393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05912 (tyrosyl-tRNA synthetase; Validated), RVT-GII, GIIM (pfam08388), NrnA (COG0618)

Seq: CACWLF010000038.1 (17234 bp)
Overview 1 RT 1: 10401-15252 bp Neighborhood of RT #1 [10401, 15287] DUF4194 DUF3375 RVT-GII AAA-ATPase_like PDDEXK_9 Feature: gene Location: 10401-11147 bp Feature: domain Description: DUF4194 Location: 10512-11037 bp Feature: domain Description: DUF4194 Location: 10512-1103 7 bp Feature: gene Location: 11157-12641 bp Feature: domain Description: DUF3375 Location: 11196-12591 bp Feature: domain Description: DUF3 3 75 Location: 11196-12591 bp Feature: gene Location: 13072-13350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13075-13219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 075-13 219 bp Feature: gene Location: 13384-13527 bp Feature: gene Location: 13596-15287 bp Feature: domain Description: AAA-ATPase_like Location: 13680-14520 bp Feature: domain Description: AAA-ATPase_like Location: 13 680-14520 bp Feature: domain Description: PDDEXK_9 Location: 15012-15252 bp Feature: domain Description: PDDEXK_9 Location: 15012-15252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4194 (pfam13835), DUF3375 (pfam11855), RVT-GII, AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: CACWLF010000101.1 (7146 bp)
Overview 1 RT 1: 676-4447 bp Neighborhood of RT #1 [676, 4447] 2-Hacid_dh_4 RVT-UG17 Feature: gene Location: 676-840 bp Feature: gene Location: 1042-2040 bp Feature: domain Description: 2-Hacid_dh_4 Location: 1177-2017 bp Feature: domain Description: 2-Hacid_dh_4 Location: 1177-2017 bp Feature: gene Location: 2129-3757 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2465-3056 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 24 65-3056 bp Feature: gene Location: 3759-4076 bp Feature: gene Location: 4316-4447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2-Hacid_dh_4 (cd12162), RVT-UG17