myRT

myRT report for GCA_902762165.1_Rumen_uncultured_genome_RUG10730

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Seq: CACWMW010000008.1 (83874 bp)
Overview 1 RT 1: 19562-22338 bp Neighborhood of RT #1 [19562, 22355] RVT-UG26 Big_2 LbH_gamma_CA_like Feature: gene Location: 19562-19741 bp Feature: gene Location: 19719-19988 bp Feature: gene Location: 20023-20727 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 20176-20683 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 201 76-20683 bp Feature: gene Location: 20873-21685 bp Feature: domain Description: Big_2 Location: 21152-21257 bp Feature: domain Description: Big_2 Location: 21 1 52-21 257 bp Feature: gene Location: 21888-22355 bp Feature: domain Description: LbH_gamma_CA_like Location: 21897-22338 bp Feature: domain Description: LbH_gamma_CA_like Location: 21 897-22338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Big_2 (pfam02368), LbH_gamma_CA_like (cd04645)

Seq: CACWMW010000029.1 (33821 bp)
Overview 1 RT 1: 53-3522 bp Neighborhood of RT #1 [53, 3614] RVT-GII BsuBI_PstI_RE_N BsuBI_PstI_RE met_A_Alw26 met_A_Alw26 Feature: gene Location: 53-709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-683 bp Feature: gene Location: 1205-2125 bp Feature: domain Description: BsuBI_PstI_RE_N Location: 1211-1610 bp Feature: domain Description: BsuBI_PstI_RE_N Location: 12 11-1610 bp Feature: domain Description: BsuBI_PstI_RE Location: 1646-2099 bp Feature: domain Description: BsuBI_PstI_RE Location: 1646-2 099 bp Feature: gene Location: 2118-3614 bp Feature: domain Description: met_A_Alw26 Location: 2184-2580 bp Feature: domain Description: met_A_Alw2 6 Location: 2 184-2 580 bp Feature: domain Description: met_A_Alw26 Location: 2628-3522 bp Feature: domain Description: met_A_Alw2 6 Location: 2 62 8-352 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, BsuBI_PstI_RE_N (pfam17728), BsuBI_PstI_RE (pfam06616), met_A_Alw26 (TIGR02987)

Seq: CACWMW010000015.1 (79878 bp)
Overview 1 RT 1: 26974-30290 bp Neighborhood of RT #1 [26974, 30290] Phage_XkdX RVT-DGRs Feature: gene Location: 26974-27186 bp Feature: gene Location: 27152-27295 bp Feature: domain Description: Phage_XkdX Location: 27182-27287 bp Feature: domain Description: Phage_XkdX Location: 27182-27287 bp Feature: gene Location: 27510-28658 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27753-28362 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27753 -283 62 bp Feature: gene Location: 28740-28952 bp Feature: gene Location: 29001-30290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: CACWMW010000045.1 (40070 bp)
Overview 1 RT 1: 36683-39896 bp Neighborhood of RT #1 [36683, 40069] MobA_MobL RVT-GII GIIM Feature: gene Location: 36683-38308 bp Feature: domain Description: MobA_MobL Location: 36755-37475 bp Feature: domain Description: MobA_MobL Location: 36755-374 75 bp Feature: gene Location: 38611-38967 bp Feature: gene Location: 39179-40069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39239-39617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39239-39617 bp Feature: domain Description: GIIM Note: maturase Location: 39674-39896 bp Feature: domain Description: GIIM Note: maturase Location: 39674 -39896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobA_MobL (pfam03389), RVT-GII, GIIM (pfam08388)

Seq: CACWMW010000087.1 (8529 bp)
Overview 1 RT 1: 2797-8295 bp Neighborhood of RT #1 [2797, 8411] DNA_binding_1 protocat_pcaD RVT-GII GIIM COG1373 Acetyltransf_10 Feature: gene Location: 2797-3273 bp Feature: domain Description: DNA_binding_1 Location: 2947-3196 bp Feature: domain Description: DNA_binding_1 Location: 2947-3196 bp Feature: gene Location: 3393-4376 bp Feature: domain Description: protocat_pcaD Location: 3552-3924 bp Feature: domain Description: protocat_pcaD Location: 35 5 2-3924 bp Feature: gene Location: 4486-6072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5029-5722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 029-5 722 bp Feature: domain Description: GIIM Note: maturase Location: 5782-6001 bp Feature: domain Description: GIIM Note: maturase Location: 5 782-6001 bp Feature: gene Location: 6227-7558 bp Feature: domain Description: COG1373 Location: 6236-7496 bp Feature: domain Description: COG1373 Location: 6236-7496 bp Feature: gene Location: 7875-8411 bp Feature: domain Description: Acetyltransf_10 Location: 8010-8295 bp Feature: domain Description: Acetyltransf_10 Location: 8010-8295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_binding_1 (pfam01035), protocat_pcaD (TIGR02427), RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily ), Acetyltransf_10 (pfam13673)