myRT

myRT report for GCA_902762925.1_Rumen_uncultured_genome_RUG10815

Download annotations/find similar RTs

Seq: CACWQJ010000001.1 uncultured Prevotellaceae bacterium isolate RUG10815 genome assembly, contig: RUG10815_asm_1, whole genome shotgun sequence (65258 bp)
Overview 1 RT 1: 11495-21127 bp Neighborhood of RT #1 [11495, 21153] RVT-DGRs DUF1566 Feature: gene Location: 11495-11782 bp Feature: gene Location: 11779-12393 bp Feature: gene Location: 12380-13768 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12770-13487 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 2770-1 3487 bp Feature: gene Location: 13765-14217 bp Feature: gene Location: 14356-21153 bp Feature: domain Description: DUF1566 Location: 20845-21127 bp Feature: domain Description: DUF1 566 Location: 20845-21 1 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF1566 (pfam07603)

Seq: CACWQJ010000061.1 uncultured Prevotellaceae bacterium isolate RUG10815 genome assembly, contig: RUG10815_asm_61, whole genome shotgun sequence (15125 bp)
Overview 1 RT 1: 41-11022 bp Neighborhood of RT #1 [41, 11022] LRR_5 RVT-DGRs DUF4376 Feature: gene Location: 41-8146 bp Feature: domain Description: LRR_5 Location: 6437-6764 bp Feature: domain Description: LRR_5 Location: 6437-6764 bp Feature: gene Location: 8264-8410 bp Feature: gene Location: 8663-10030 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8915-9515 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8915-9515 bp Feature: gene Location: 10040-10735 bp Feature: domain Description: DUF4376 Location: 10382-10673 bp Feature: domain Description: DUF4376 Location: 10382 -10673 bp Feature: gene Location: 10735-11022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4376 (pfam14301), LRR_5 (pfam13306), RVT-DGRs

Seq: CACWQJ010000086.1 uncultured Prevotellaceae bacterium isolate RUG10815 genome assembly, contig: RUG10815_asm_86, whole genome shotgun sequence (14537 bp)
Overview 1 RT 1: 41-9634 bp Neighborhood of RT #1 [41, 9634] DUF1566 RVT-DGRs Feature: gene Location: 41-7093 bp Feature: domain Description: DUF1566 Location: 6788-7067 bp Feature: domain Description: DUF1566 Location: 6788-7067 bp Feature: gene Location: 7228-7674 bp Feature: gene Location: 7671-9059 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8058-8772 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8058-8772 bp Feature: gene Location: 9043-9252 bp Feature: gene Location: 9260-9634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs

Seq: CACWQJ010000096.1 uncultured Prevotellaceae bacterium isolate RUG10815 genome assembly, contig: RUG10815_asm_96, whole genome shotgun sequence (9054 bp)
Overview 1 RT 1: 1-2349 bp Neighborhood of RT #1 [1, 2349] RVT-GII Lipocalin_4 Feature: gene Location: 1-555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217-553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217-553 bp Feature: gene Location: 1015-1410 bp Feature: domain Description: Lipocalin_4 Location: 1129-1342 bp Feature: domain Description: Lipocalin_4 Location: 1129-134 2 bp Feature: gene Location: 1486-2349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lipocalin_4 (pfam13648), RVT-GII