myRT

myRT report for GCA_902763035.1_Rumen_uncultured_genome_RUG10820

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Seq: CACWQN010000009.1 uncultured Prevotella sp. isolate RUG10820 genome assembly, contig: RUG10820_asm_9, whole genome shotgun sequence (105555 bp)
Overview 1 RT 1: 29255-32554 bp Neighborhood of RT #1 [29255, 32754] Avd_like RVT-DGRs MutS_I PDDEXK_2 Feature: gene Location: 29255-29497 bp Feature: gene Location: 29501-29851 bp Feature: domain Description: Avd_like Location: 29528-29834 bp Feature: domain Description: Avd_like Location: 29528-29834 bp Feature: gene Location: 29871-31133 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30087-30777 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30087-30777 bp Feature: gene Location: 31093-31584 bp Feature: domain Description: MutS_I Location: 31150-31384 bp Feature: domain Description: MutS_I Location: 31 1 50-31 384 bp Feature: gene Location: 31852-32754 bp Feature: domain Description: PDDEXK_2 Location: 31873-32554 bp Feature: domain Description: PDDEXK_2 Location: 31 873-32554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, MutS_I (pfam01624), PDDEXK_2 (pfam12784)

Seq: CACWQN010000069.1 uncultured Prevotella sp. isolate RUG10820 genome assembly, contig: RUG10820_asm_69, whole genome shotgun sequence (14624 bp)
Overview 1 RT 1: 1-3240 bp Neighborhood of RT #1 [1, 3302] RVT-GII GIIM ATPase_2 DUF4972 Lipocalin_4 Feature: gene Location: 1-1302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 38-856 bp Feature: domain Description: GIIM Note: maturase Location: 910-1120 bp Feature: domain Description: GIIM Note: maturase Location: 910-112 0 bp Feature: gene Location: 1561-2697 bp Feature: domain Description: ATPase_2 Location: 1630-2356 bp Feature: domain Description: ATPase_2 Location: 1630-2 356 bp Feature: gene Location: 2832-3302 bp Feature: domain Description: DUF4972 Location: 2856-2955 bp Feature: domain Description: DUF4972 Location: 2 856-2 955 bp Feature: domain Description: Lipocalin_4 Location: 2955-3240 bp Feature: domain Description: Lipocalin_4 Location: 2 955-32 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ATPase_2 (pfam01637), DUF4972 (pfam16342), Lipocalin_4 (pfam13648)