myRT

myRT report for GCA_902763115.1_Rumen_uncultured_genome_RUG10830

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Seq: CACWQZ010000003.1 uncultured Methanobrevibacter sp. isolate RUG10830 genome assembly, contig: RUG10830_asm_3, whole genome shotgun sequence (107055 bp)
Overview 1 RT 1: 100636-106313 bp Neighborhood of RT #1 [100636, 106313] RVT-UG5 nitrilase Ugd Feature: gene Location: 100636-100953 bp Feature: gene Location: 101009-101968 bp Feature: gene Location: 102174-105857 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 102705-103206 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 02705-1 03206 bp Feature: domain Description: nitrilase Location: 104610-105270 bp Feature: domain Description: nitrilase Location: 1 0461 0-1 05270 bp Feature: domain Description: Ugd Location: 105426-105795 bp Feature: domain Description: Ugd Location: 1 05426-1 05795 bp Feature: gene Location: 106053-106313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), Ugd (COG1004)

Seq: CACWQZ010000027.1 uncultured Methanobrevibacter sp. isolate RUG10830 genome assembly, contig: RUG10830_asm_27, whole genome shotgun sequence (25305 bp)
Overview 1 RT 1: 739-3590 bp Neighborhood of RT #1 [739, 3601] RVT_N RVT-GII GIIM HTH_ARSR Feature: gene Location: 739-2232 bp Feature: domain Description: RVT_N Location: 799-1045 bp Feature: domain Description: RVT_N Location: 799-1045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099-1768 bp Feature: domain Description: GIIM Note: maturase Location: 1831-2065 bp Feature: domain Description: GIIM Note: maturase Location: 1831-2 065 bp Feature: gene Location: 2771-3208 bp Feature: gene Location: 3356-3601 bp Feature: domain Description: HTH_ARSR Location: 3392-3590 bp Feature: domain Description: HTH_ARSR Location: 3392 -3590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_ARSR (smart00418)