myRT

myRT report for GCA_902764915.1_Rumen_uncultured_genome_RUG11012

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Seq: CACWXY010000062.1 uncultured Clostridiales bacterium isolate RUG11012 genome assembly, contig: RUG11012_asm_62, whole genome shotgun sequence (16905 bp)
Overview 1 RT 1: 4870-6819 bp Neighborhood of RT #1 [4870, 6938] RVT-GII LysR Feature: gene Location: 4870-5013 bp Feature: gene Location: 5023-5220 bp Feature: gene Location: 5271-5810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5559-5763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5559-5763 bp Feature: gene Location: 5836-6012 bp Feature: gene Location: 6009-6938 bp Feature: domain Description: LysR Location: 6012-6819 bp Feature: domain Description: LysR Location: 601 2-681 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LysR (COG0583)

Seq: CACWXY010000067.1 uncultured Clostridiales bacterium isolate RUG11012 genome assembly, contig: RUG11012_asm_67, whole genome shotgun sequence (45066 bp)
Overview 1 RT 1: 36822-40290 bp Neighborhood of RT #1 [36822, 40290] DUF4869 ABC_ATPase RVT-DGRs PRK09736 Feature: gene Location: 36822-37259 bp Feature: domain Description: DUF4869 Location: 36861-37236 bp Feature: domain Description: DUF4869 Location: 36861-372 36 bp Feature: gene Location: 37266-38237 bp Feature: domain Description: ABC_ATPase Location: 37308-37665 bp Feature: domain Description: ABC_ATPase Location: 37308-37665 bp Feature: gene Location: 38239-39303 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38440-39052 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38440-39052 bp Feature: gene Location: 39815-40075 bp Feature: domain Description: PRK09736 Location: 39824-40070 bp Feature: domain Description: PRK09736 Location: 3982 4-40070 bp Feature: gene Location: 40072-40290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4869 (pfam16163), ABC_ATPase (pfam09818), RVT-DGRs, PRK09736 (5-methylcytosine-specific restriction enzyme subunit McrC; Provisional)

Seq: CACWXY010000072.1 uncultured Clostridiales bacterium isolate RUG11012 genome assembly, contig: RUG11012_asm_72, whole genome shotgun sequence (11767 bp)
Overview 1 RT 1: 9183-11767 bp Neighborhood of RT #1 [9183, 11766] CE4_GLA_like_6s RVT-GII Feature: gene Location: 9183-9416 bp Feature: gene Location: 9448-10164 bp Feature: domain Description: CE4_GLA_like_6s Location: 9622-10099 bp Feature: domain Description: CE4_GLA_like_6s Location: 9622-10099 bp Feature: gene Location: 10714-11766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11011-11767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11011-11767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, CE4_GLA_like_6s (cd10967)

Seq: CACWXY010000122.1 uncultured Clostridiales bacterium isolate RUG11012 genome assembly, contig: RUG11012_asm_122, whole genome shotgun sequence (3279 bp)
Overview 1 RT 1: 304-3222 bp Neighborhood of RT #1 [304, 3278] RVT-GII TraC-F-type Feature: gene Location: 304-1401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 616-1303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 616-1303 bp Feature: gene Location: 1701-2045 bp Feature: gene Location: 2124-3278 bp Feature: domain Description: TraC-F-type Location: 2136-3222 bp Feature: domain Description: TraC-F-type Location: 2136-3222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII