myRT

myRT report for GCA_902764925.1_Rumen_uncultured_genome_RUG11015

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Seq: CACWXX010000021.1 uncultured Lachnospiraceae bacterium isolate RUG11015 genome assembly, contig: RUG11015_asm_21, whole genome shotgun sequence (22586 bp)
Overview 1 RT 1: 17961-22472 bp Neighborhood of RT #1 [17961, 22585] cmk PRK00087 rpsA RVT-GII GIIM Feature: gene Location: 17961-19532 bp Feature: domain Description: cmk Location: 17967-18672 bp Feature: domain Description: cmk Location: 1 7967-1 8672 bp Feature: domain Description: PRK00087 Location: 18687-19521 bp Feature: domain Description: PRK00087 Location: 1 8687-1 9521 bp Feature: gene Location: 19510-20721 bp Feature: domain Description: rpsA Location: 19531-20623 bp Feature: domain Description: rpsA Location: 1 9531 -20623 bp Feature: gene Location: 21233-22585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21578-22202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 578-22202 bp Feature: domain Description: GIIM Note: maturase Location: 22259-22472 bp Feature: domain Description: GIIM Note: maturase Location: 22259-22472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cmk (TIGR00017), PRK00087 (bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388)

Seq: CACWXX010000079.1 uncultured Lachnospiraceae bacterium isolate RUG11015 genome assembly, contig: RUG11015_asm_79, whole genome shotgun sequence (6597 bp)
Overview 1 RT 1: 1-3622 bp Neighborhood of RT #1 [1, 3624] RVT-GII GIIM PRK09943 Feature: gene Location: 1-291 bp Feature: gene Location: 293-598 bp Feature: gene Location: 644-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1646-1859 bp Feature: domain Description: GIIM Note: maturase Location: 1646-1859 bp Feature: gene Location: 2276-2527 bp Feature: gene Location: 3067-3624 bp Feature: domain Description: PRK09943 Location: 3094-3622 bp Feature: domain Description: PRK09943 Location: 3094-362 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09943 (HTH-type transcriptional regulator PuuR), RVT-GII, GIIM (pfam08388)