myRT

myRT report for GCA_902765305.1_Rumen_uncultured_genome_RUG11052

Download annotations/find similar RTs

Seq: CACWZI010000001.1 uncultured Clostridiales bacterium isolate RUG11052 genome assembly, contig: RUG11052_asm_1, whole genome shotgun sequence (87502 bp)
Overview 1 RT 1: 44606-49527 bp Neighborhood of RT #1 [44606, 50057] DUF3990 HTH_XRE RVT-UG17 Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 44606-45283 bp Feature: domain Description: DUF3990 Location: 44618-45110 bp Feature: domain Description: DUF3990 Location: 4461 8-451 1 0 bp Feature: gene Location: 45264-45899 bp Feature: domain Description: HTH_XRE Location: 45717-45879 bp Feature: domain Description: HTH_XRE Location: 4571 7-45879 bp Feature: gene Location: 46752-48086 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 46980-47577 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 46980-47577 bp Feature: gene Location: 48172-48420 bp Feature: gene Location: 48417-50057 bp Feature: domain Description: Resolvase Location: 48435-48888 bp Feature: domain Description: Resolvase Location: 48435-48888 bp Feature: domain Description: Recombinase Location: 48993-49167 bp Feature: domain Description: Recombinase Location: 48993-491 67 bp Feature: domain Description: Zn_ribbon_recom Location: 49332-49527 bp Feature: domain Description: Zn_ribbon_recom Location: 49332-49527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3990 (pfam13151), HTH_XRE (smart00530), RVT-UG17, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: CACWZI010000114.1 uncultured Clostridiales bacterium isolate RUG11052 genome assembly, contig: RUG11052_asm_114, whole genome shotgun sequence (25748 bp)
Overview 1 RT 1: 15543-20888 bp Neighborhood of RT #1 [15543, 20896] RVT-GII GIIM OmpR BaeS Feature: gene Location: 15543-16400 bp Feature: gene Location: 16472-17056 bp Feature: gene Location: 17777-18994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17963-18626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17963-1862 6 bp Feature: domain Description: GIIM Note: maturase Location: 18701-18899 bp Feature: domain Description: GIIM Note: maturase Location: 18701-18899 bp Feature: gene Location: 19119-19793 bp Feature: domain Description: OmpR Location: 19128-19785 bp Feature: domain Description: OmpR Location: 1912 8-19785 bp Feature: gene Location: 19895-20896 bp Feature: domain Description: BaeS Location: 19991-20888 bp Feature: domain Description: BaeS Location: 19991-2 0888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), OmpR (COG0745), BaeS (COG0642)