myRT

myRT report for GCA_902766045.1_Rumen_uncultured_genome_RUG11121

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Seq: CACXCA010000015.1 uncultured Bacteroidales bacterium isolate RUG11121 genome assembly, contig: RUG11121_asm_15, whole genome shotgun sequence (199734 bp)
Overview 1 RT 1: 104893-112756 bp Neighborhood of RT #1 [104893, 112770] COG3177 RMtype1_S_Hpy180ORF7835P_TRD2-CR2_like RMtype1_S_Hpy180ORF7835P_TRD2-CR2_like RVT-UG5 COG2865 Feature: gene Location: 104893-106209 bp Feature: domain Description: COG3177 Location: 104953-105832 bp Feature: domain Description: COG31 77 Location: 1 04953-1 05832 bp Feature: gene Location: 106218-107465 bp Feature: domain Description: RMtype1_S_Hpy180ORF7835P_TRD2-CR2_like Location: 106584-106836 bp Feature: domain Description: RMtype1 _S_Hpy1 80ORF7835P_TRD2-CR2_like Location: 1 06584-1 06836 bp Feature: domain Description: RMtype1_S_Hpy180ORF7835P_TRD2-CR2_like Location: 106896-107433 bp Feature: domain Description: RMtype1 _S_Hpy1 80ORF7835P_TRD2-CR2_like Location: 1 06896-1 07433 bp Feature: gene Location: 107467-110343 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 107959-108385 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 07959-1 08385 bp Feature: gene Location: 110507-111250 bp Feature: gene Location: 111247-112770 bp Feature: domain Description: COG2865 Location: 111298-112756 bp Feature: domain Description: COG2865 Location: 1 1 1 298-1 1 2756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RMtype1_S_Hpy180ORF7835P_TRD2-CR2_like (cd17283), RVT-UG5, COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: CACXCA010000034.1 uncultured Bacteroidales bacterium isolate RUG11121 genome assembly, contig: RUG11121_asm_34, whole genome shotgun sequence (7700 bp)
Overview 1 RT 1: 1-3387 bp Neighborhood of RT #1 [1, 3387] RVT-UG28b VirE_N PriCT_2 Feature: gene Location: 1-1389 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 439-1168 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 439-1168 bp Feature: gene Location: 1555-2553 bp Feature: domain Description: VirE_N Location: 1720-2098 bp Feature: domain Description: VirE_N Location: 172 0-2 098 bp Feature: domain Description: PriCT_2 Location: 2290-2515 bp Feature: domain Description: PriCT_2 Location: 2 2 90-2 515 bp Feature: gene Location: 2566-3387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, VirE_N (pfam08800), PriCT_2 (pfam08707)