myRT

myRT report for GCA_902766085.1_Rumen_uncultured_genome_RUG11129

Download annotations/find similar RTs

Seq: CACXCH010000008.1 uncultured Clostridiales bacterium isolate RUG11129 genome assembly, contig: RUG11129_asm_8, whole genome shotgun sequence (4285 bp)
Overview 1 RT 1: 3-2257 bp Neighborhood of RT #1 [3, 2262] RVT-DGRs MntR mnmA Feature: gene Location: 3-497 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15-279 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 5-279 bp Feature: gene Location: 606-1055 bp Feature: domain Description: MntR Location: 612-960 bp Feature: domain Description: MntR Location: 61 2-960 bp Feature: gene Location: 1210-2262 bp Feature: domain Description: mnmA Location: 1216-2257 bp Feature: domain Description: mnmA Location: 1 21 6-2257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mnmA (PRK14665), RVT-DGRs, MntR (COG1321)

Seq: CACXCH010000055.1 uncultured Clostridiales bacterium isolate RUG11129 genome assembly, contig: RUG11129_asm_55, whole genome shotgun sequence (3778 bp)
Overview 1 RT 1: 1-2355 bp Neighborhood of RT #1 [1, 2355] MutS_I RVT-DGRs Avd_like Feature: gene Location: 1-501 bp Feature: domain Description: MutS_I Location: 79-274 bp Feature: domain Description: MutS_I Location: 79-2 74 bp Feature: gene Location: 515-1498 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 755-1349 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 755-1349 bp Feature: gene Location: 1468-1812 bp Feature: domain Description: Avd_like Location: 1510-1807 bp Feature: domain Description: Avd_like Location: 1510-1807 bp Feature: gene Location: 1909-2355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), MutS_I (pfam01624), RVT-DGRs

Seq: CACXCH010000061.1 uncultured Clostridiales bacterium isolate RUG11129 genome assembly, contig: RUG11129_asm_61, whole genome shotgun sequence (2299 bp)
Overview 1 RT 1: 3-1406 bp Neighborhood of RT #1 [3, 2296] COG4646 RVT-GII Feature: gene Location: 3-242 bp Feature: domain Description: COG4646 Location: 6-243 bp Feature: domain Description: COG4646 Location: 6-243 bp Feature: gene Location: 401-2296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-1406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-1406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII