myRT

myRT report for GCA_902766505.1_Rumen_uncultured_genome_RUG11177

Download annotations/find similar RTs

Seq: CACXDY010000292.1 uncultured Prevotellaceae bacterium isolate RUG11177 genome assembly, contig: RUG11177_asm_292, whole genome shotgun sequence (14148 bp)
Overview 1 RT 1: 1747-5069 bp Neighborhood of RT #1 [1747, 5074] YfmG HRDC RVT-DGRs ribH Feature: gene Location: 1747-2655 bp Feature: domain Description: YfmG Location: 1858-2623 bp Feature: domain Description: YfmG Location: 1 858-2623 bp Feature: gene Location: 2790-3272 bp Feature: domain Description: HRDC Location: 3024-3213 bp Feature: domain Description: HRDC Location: 3024-321 3 bp Feature: gene Location: 3250-4230 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3442-4024 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3442-4024 bp Feature: gene Location: 4416-4544 bp Feature: gene Location: 4598-5074 bp Feature: domain Description: ribH Location: 4649-5069 bp Feature: domain Description: ribH Location: 4649-5069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), HRDC (smart00341), RVT-DGRs, ribH (PRK00061)

Seq: CACXDY010000430.1 uncultured Prevotellaceae bacterium isolate RUG11177 genome assembly, contig: RUG11177_asm_430, whole genome shotgun sequence (9071 bp)
Overview 1 RT 1: 825-4118 bp Neighborhood of RT #1 [825, 4118] GH25_muramidase_1 RVT-AbiP2 Feature: gene Location: 825-1511 bp Feature: domain Description: GH25_muramidase_1 Location: 942-1476 bp Feature: domain Description: GH2 5_muramidase_1 Location: 942 -1476 bp Feature: gene Location: 1540-2169 bp Feature: gene Location: 2202-3206 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2631-3087 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 631-3087 bp Feature: gene Location: 3470-3811 bp Feature: gene Location: 3837-4118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH25_muramidase_1 (cd06413), RVT-AbiP2

Seq: CACXDY010000436.1 uncultured Prevotellaceae bacterium isolate RUG11177 genome assembly, contig: RUG11177_asm_436, whole genome shotgun sequence (3480 bp)
Overview 1 RT 1: 3-3017 bp Neighborhood of RT #1 [3, 3478] NHT_00031 WcaJ RVT-UG28b VirE_N Feature: gene Location: 3-209 bp Feature: domain Description: NHT_00031 Location: 54-159 bp Feature: domain Description: NHT_0003 1 Location: 54-159 bp Feature: gene Location: 221-895 bp Feature: domain Description: WcaJ Location: 227-869 bp Feature: domain Description: WcaJ Location: 227-869 bp Feature: gene Location: 915-2693 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1350-2112 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 13 50-2112 bp Feature: gene Location: 2825-3478 bp Feature: domain Description: VirE_N Location: 2828-3017 bp Feature: domain Description: VirE_N Location: 2828-3 017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHT_00031 (TIGR04181), WcaJ (COG2148), RVT-UG28b, VirE_N (pfam08800)