myRT

myRT report for GCA_902766775.1_Rumen_uncultured_genome_RUG11191

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Seq: CACXEX010000135.1 uncultured Ruminococcus sp. isolate RUG11191 genome assembly, contig: RUG11191_asm_135, whole genome shotgun sequence (10632 bp)
Overview 1 RT 1: 2974-7164 bp Neighborhood of RT #1 [2974, 7370] SmpB RVT-Retrons AcrR Feature: gene Location: 2974-3432 bp Feature: domain Description: SmpB Location: 2983-3424 bp Feature: domain Description: SmpB Location: 2983-3424 bp Feature: gene Location: 3589-4062 bp Feature: gene Location: 4174-5862 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4300-4900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4300-4900 bp Feature: gene Location: 6022-6267 bp Feature: gene Location: 6702-7370 bp Feature: domain Description: AcrR Location: 6726-7164 bp Feature: domain Description: AcrR Location: 6726-71 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), RVT-Retrons, AcrR (COG1309)

Seq: CACXEX010000184.1 uncultured Ruminococcus sp. isolate RUG11191 genome assembly, contig: RUG11191_asm_184, whole genome shotgun sequence (5456 bp)
Overview 1 RT 1: 1-3048 bp Neighborhood of RT #1 [1, 3048] RVT-Retrons HTH_XRE Feature: gene Location: 1-144 bp Feature: gene Location: 334-489 bp Feature: gene Location: 740-1858 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1019-1571 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1019-1571 bp Feature: gene Location: 1908-2246 bp Feature: domain Description: HTH_XRE Location: 1977-2145 bp Feature: domain Description: HTH_XRE Location: 1977-2 145 bp Feature: gene Location: 2311-3048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons