myRT

myRT report for GCA_902767725.1_Rumen_uncultured_genome_RUG11296

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Seq: CACXIM010000004.1 uncultured Bacteroidia bacterium isolate RUG11296 genome assembly, contig: RUG11296_asm_4, whole genome shotgun sequence (62676 bp)
Overview 1 RT 1: 18394-28738 bp Neighborhood of RT #1 [18394, 28875] Avd_like DUF1566 RVT-DGRs ChiA1_BD ChiA1_BD SMC_prok_B Feature: gene Location: 18394-25308 bp Feature: gene Location: 25402-25785 bp Feature: domain Description: Avd_like Location: 25426-25768 bp Feature: domain Description: Avd_like Location: 25426-25768 bp Feature: gene Location: 25787-27322 bp Feature: domain Description: DUF1566 Location: 25853-26006 bp Feature: domain Description: DUF1 566 Location: 25853-26006 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26189-26912 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 261 89-2691 2 bp Feature: gene Location: 27222-27971 bp Feature: domain Description: ChiA1_BD Location: 27678-27807 bp Feature: domain Description: ChiA1 _BD Location: 27678-27807 bp Feature: domain Description: ChiA1_BD Location: 27858-27960 bp Feature: domain Description: ChiA1 _BD Location: 27858-27960 bp Feature: gene Location: 28294-28875 bp Feature: domain Description: SMC_prok_B Location: 28486-28738 bp Feature: domain Description: SMC_prok_B Location: 28486-28738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), DUF1566 (pfam07603), RVT-DGRs, ChiA1_BD (cd12214), SMC_prok_B (TIGR02168)

Seq: CACXIM010000032.1 uncultured Bacteroidia bacterium isolate RUG11296 genome assembly, contig: RUG11296_asm_32, whole genome shotgun sequence (27271 bp)
Overview 1 RT 1: 624-6332 bp Neighborhood of RT #1 [624, 6364] LRR_5 LRR_3 LRR_5 Por_Secre_tail RVT-UG26 LutB LacAB_rpiB Feature: gene Location: 624-2225 bp Feature: domain Description: LRR_5 Location: 873-1146 bp Feature: domain Description: LRR_5 Location: 873-1146 bp Feature: domain Description: LRR_3 Location: 1200-1353 bp Feature: domain Description: LRR_3 Location: 12 00-1353 bp Feature: domain Description: LRR_5 Location: 1377-1677 bp Feature: domain Description: LRR_5 Location: 1377-1677 bp Feature: domain Description: Por_Secre_tail Location: 2022-2214 bp Feature: domain Description: Por_Secre_tail Location: 2 02 2 -2 2 14 bp Feature: gene Location: 2297-2812 bp Feature: gene Location: 2976-4250 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3246-3864 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 32 46-3864 bp Feature: gene Location: 4504-5874 bp Feature: domain Description: LutB Location: 4558-5719 bp Feature: domain Description: LutB Location: 4558-5719 bp Feature: gene Location: 5861-6364 bp Feature: domain Description: LacAB_rpiB Location: 5921-6332 bp Feature: domain Description: LacAB_rpiB Location: 592 1-6332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LRR_5 (pfam13306), LRR_3 (sd00036), Por_Secre_tail (TIGR04183), RVT-UG26, LutB (COG1139), LacAB_rpiB (pfam02502)