myRT

myRT report for GCA_902767775.1_Rumen_uncultured_genome_RUG11288

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Seq: CACXIP010000011.1 uncultured Prevotellaceae bacterium isolate RUG11288 genome assembly, contig: RUG11288_asm_11, whole genome shotgun sequence (134341 bp)
Overview 1 RT 1: 83096-91991 bp Neighborhood of RT #1 [83096, 92587] WYL RVT-Retrons Response_reg Feature: gene Location: 83096-86155 bp Feature: gene Location: 86223-87263 bp Feature: domain Description: WYL Location: 86640-87225 bp Feature: domain Description: WYL Location: 86640-87225 bp Feature: gene Location: 87524-89170 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87707-88295 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87707-88295 bp Feature: gene Location: 89250-90440 bp Feature: gene Location: 90443-92587 bp Feature: domain Description: Response_reg Location: 91757-91991 bp Feature: domain Description: Response_reg Location: 91 757-91 991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons, Response_reg (pfam00072)

Seq: CACXIP010000014.1 uncultured Prevotellaceae bacterium isolate RUG11288 genome assembly, contig: RUG11288_asm_14, whole genome shotgun sequence (105210 bp)
Overview 1 RT 1: 52043-58899 bp Neighborhood of RT #1 [52043, 58910] MFS_ExuT_GudP_like RVT-AbiP2 ARS_like PRK13745 Feature: gene Location: 52043-52705 bp Feature: gene Location: 52705-53946 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 52717-53920 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 52 717-5392 0 bp Feature: gene Location: 53971-55758 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 54523-55006 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5452 3-55006 bp Feature: gene Location: 56199-57740 bp Feature: domain Description: ARS_like Location: 56448-57672 bp Feature: domain Description: ARS_like Location: 56448-57672 bp Feature: gene Location: 57747-58910 bp Feature: domain Description: PRK13745 Location: 57765-58899 bp Feature: domain Description: PRK13745 Location: 57765-58899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_ExuT_GudP_like (cd17319), RVT-AbiP2, ARS_like (cd16146), PRK13745 (anaerobic sulfatase-maturation protein)

Seq: CACXIP010000020.1 uncultured Prevotellaceae bacterium isolate RUG11288 genome assembly, contig: RUG11288_asm_20, whole genome shotgun sequence (100826 bp)
Overview 1 RT 1: 30240-33063 bp Neighborhood of RT #1 [30240, 33063] RVT-GII GIIM Feature: gene Location: 30240-30710 bp Feature: gene Location: 30989-31165 bp Feature: gene Location: 31188-32321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31692-32310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1692-3 23 10 bp Feature: gene Location: 32337-32753 bp Feature: domain Description: GIIM Note: maturase Location: 32367-32595 bp Feature: domain Description: GIIM Note: maturase Location: 3 23 67-3 2595 bp Feature: gene Location: 32869-33063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CACXIP010000022.1 uncultured Prevotellaceae bacterium isolate RUG11288 genome assembly, contig: RUG11288_asm_22, whole genome shotgun sequence (180361 bp)
Overview 1 RT 1: 1-4207 bp Neighborhood of RT #1 [1, 4218] RVT-Retrons Peptidase_S41_CPP PRK02001 Feature: gene Location: 1-126 bp Feature: gene Location: 167-415 bp Feature: gene Location: 434-1303 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 620-1130 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 620-1130 bp Feature: gene Location: 1760-3520 bp Feature: domain Description: Peptidase_S41_CPP Location: 1928-3005 bp Feature: domain Description: Peptidase_S4 1_CPP Location: 1928-3005 bp Feature: gene Location: 3751-4218 bp Feature: domain Description: PRK02001 Location: 3754-4207 bp Feature: domain Description: PRK02001 Location: 3754 -4 207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Peptidase_S41_CPP (cd07560), PRK02001 (ribosome assembly cofactor RimP)