myRT

myRT report for GCA_902768215.1_Rumen_uncultured_genome_RUG11343

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Seq: CACXKJ010000015.1 uncultured bacterium isolate RUG11343 genome assembly, contig: RUG11343_asm_15, whole genome shotgun sequence (185390 bp)
Overview 1 RT 1: 39218-44318 bp Neighborhood of RT #1 [39218, 44338] DnaB RVT-Retrons PDDEXK_4 WYL Feature: gene Location: 39218-39616 bp Feature: gene Location: 39713-40561 bp Feature: domain Description: DnaB Location: 39773-40532 bp Feature: domain Description: DnaB Location: 39773-40532 bp Feature: gene Location: 40561-41400 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40627-41146 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40627-41 1 46 bp Feature: gene Location: 41602-43362 bp Feature: domain Description: PDDEXK_4 Location: 42673-43273 bp Feature: domain Description: PDDEXK_4 Location: 42673-43273 bp Feature: gene Location: 43367-44338 bp Feature: domain Description: WYL Location: 43826-44318 bp Feature: domain Description: WYL Location: 43826-4431 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaB (TIGR00665), RVT-Retrons, PDDEXK_4 (pfam14281), WYL (pfam13280)

Seq: CACXKJ010000049.1 uncultured bacterium isolate RUG11343 genome assembly, contig: RUG11343_asm_49, whole genome shotgun sequence (9010 bp)
Overview 1 RT 1: 3792-7714 bp Neighborhood of RT #1 [3792, 7714] WG_beta_rep WG_beta_rep WG_beta_rep DnaB_C RVT-Retrons Feature: gene Location: 3792-4838 bp Feature: domain Description: WG_beta_rep Location: 4476-4539 bp Feature: domain Description: WG_beta_rep Location: 4476-4539 bp Feature: domain Description: WG_beta_rep Location: 4599-4701 bp Feature: domain Description: WG_beta_rep Location: 4599-4701 bp Feature: domain Description: WG_beta_rep Location: 4701-4797 bp Feature: domain Description: WG_beta_rep Location: 4701-4797 bp Feature: gene Location: 4838-5623 bp Feature: domain Description: DnaB_C Location: 4937-5582 bp Feature: domain Description: DnaB_C Location: 4937-5582 bp Feature: gene Location: 5626-6483 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5650-6184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5650-6184 bp Feature: gene Location: 6636-6998 bp Feature: gene Location: 7004-7714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WG_beta_rep (pfam14903), DnaB_C (pfam03796), RVT-Retrons