myRT

myRT report for GCA_902768835.1_Rumen_uncultured_genome_RUG11405

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Seq: CACXMU010000163.1 uncultured Sutterellaceae bacterium isolate RUG11405 genome assembly, contig: RUG11405_asm_163, whole genome shotgun sequence (3872 bp)
Overview 1 RT 1: 3-3261 bp Neighborhood of RT #1 [3, 3261] RVT-Retrons N6_N4_Mtase N6_N4_Mtase Feature: gene Location: 3-1472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678-1236 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678-1 236 bp Feature: gene Location: 1469-2239 bp Feature: domain Description: N6_N4_Mtase Location: 1646-1757 bp Feature: domain Description: N6_N4_Mtase Location: 1 646-1 757 bp Feature: domain Description: N6_N4_Mtase Location: 2021-2201 bp Feature: domain Description: N6_N4_Mtase Location: 2021 -2201 bp Feature: gene Location: 2236-3261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_N4_Mtase (pfam01555), RVT-Retrons

Seq: CACXMU010000220.1 uncultured Sutterellaceae bacterium isolate RUG11405 genome assembly, contig: RUG11405_asm_220, whole genome shotgun sequence (3692 bp)
Overview 1 RT 1: 1-3063 bp Neighborhood of RT #1 [1, 3110] YqgC RVT-GII GIIM BrnA_antitoxin Feature: gene Location: 1-129 bp Feature: domain Description: YqgC Location: 7-121 bp Feature: domain Description: YqgC Location: 7-12 1 bp Feature: gene Location: 360-764 bp Feature: gene Location: 1234-2535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1462-2083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1462 -2 083 bp Feature: domain Description: GIIM Note: maturase Location: 2143-2368 bp Feature: domain Description: GIIM Note: maturase Location: 2 143-2 368 bp Feature: gene Location: 2668-2829 bp Feature: gene Location: 2889-3110 bp Feature: domain Description: BrnA_antitoxin Location: 2922-3063 bp Feature: domain Description: BrnA_antitoxin Location: 2 92 2 -3063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgC (COG2839), RVT-GII, GIIM (pfam08388), BrnA_antitoxin (pfam14384)