myRT

myRT report for GCA_902769855.1_Rumen_uncultured_genome_RUG11513

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Seq: CACXQU010000025.1 uncultured Bacteroidia bacterium isolate RUG11513 genome assembly, contig: RUG11513_asm_25, whole genome shotgun sequence (25709 bp)
Overview 1 RT 1: 1-3586 bp Neighborhood of RT #1 [1, 3594] RVT-UG26 HAD_PPase COG3537 Feature: gene Location: 1-570 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 4-184 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 4-1 84 bp Feature: gene Location: 603-1256 bp Feature: domain Description: HAD_PPase Location: 609-1239 bp Feature: domain Description: HAD_PPase Location: 609-1 239 bp Feature: gene Location: 1261-3594 bp Feature: domain Description: COG3537 Location: 1336-3586 bp Feature: domain Description: COG3537 Location: 1 336-3586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, HAD_PPase (cd07509), COG3537 (Putative alpha-1,2-mannosidase )

Seq: CACXQU010000099.1 uncultured Bacteroidia bacterium isolate RUG11513 genome assembly, contig: RUG11513_asm_99, whole genome shotgun sequence (8717 bp)
Overview 1 RT 1: 6984-8617 bp Neighborhood of RT #1 [6984, 8622] DMT_6 RVT-UG26 Feature: gene Location: 6984-7355 bp Feature: domain Description: DMT_6 Location: 7005-7347 bp Feature: domain Description: DMT_6 Location: 7005-7347 bp Feature: gene Location: 7410-7949 bp Feature: gene Location: 8119-8622 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 8308-8617 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 8308-8617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DMT_6 (pfam04342), RVT-UG26

Seq: CACXQU010000152.1 uncultured Bacteroidia bacterium isolate RUG11513 genome assembly, contig: RUG11513_asm_152, whole genome shotgun sequence (10040 bp)
Overview 1 RT 1: 3-3014 bp Neighborhood of RT #1 [3, 3014] RVT-Retrons WYL Feature: gene Location: 3-1553 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 186-783 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 186-783 bp Feature: gene Location: 2015-2611 bp Feature: domain Description: WYL Location: 2021-2546 bp Feature: domain Description: WYL Location: 2021-2546 bp Feature: gene Location: 2826-3014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WYL (pfam13280)

Seq: CACXQU010000192.1 uncultured Bacteroidia bacterium isolate RUG11513 genome assembly, contig: RUG11513_asm_192, whole genome shotgun sequence (2378 bp)
Overview 1 RT 1: 109-2283 bp Neighborhood of RT #1 [109, 2375] RVT-GII KOG4768 PRK10714 Feature: gene Location: 109-1410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364 -1051 bp Feature: domain Description: KOG4768 Location: 1123-1261 bp Feature: domain Description: KOG4 768 Location: 1123-1261 bp Feature: gene Location: 1938-2375 bp Feature: domain Description: PRK10714 Location: 1947-2283 bp Feature: domain Description: PRK10714 Location: 194 7-2283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), PRK10714 (undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional)

Seq: CACXQU010000201.1 uncultured Bacteroidia bacterium isolate RUG11513 genome assembly, contig: RUG11513_asm_201, whole genome shotgun sequence (2234 bp)
Overview 1 RT 1: 2-2232 bp Neighborhood of RT #1 [2, 2231] VirD4 RVT-GII Feature: gene Location: 2-520 bp Feature: domain Description: VirD4 Location: 125-467 bp Feature: domain Description: VirD4 Location: 125 -467 bp Feature: gene Location: 1245-2231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1554-2232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 5 4-2232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII

Seq: CACXQU010000212.1 uncultured Bacteroidia bacterium isolate RUG11513 genome assembly, contig: RUG11513_asm_212, whole genome shotgun sequence (2057 bp)
Overview 1 RT 1: 633-2056 bp Neighborhood of RT #1 [633, 2056] RVT-GII GIIM Feature: gene Location: 633-1907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1455 bp Feature: domain Description: GIIM Note: maturase Location: 1506-1737 bp Feature: domain Description: GIIM Note: maturase Location: 1506 -1737 bp Feature: gene Location: 1904-2056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)