myRT

myRT report for GCA_902769955.1_Rumen_uncultured_genome_RUG11516

Download annotations/find similar RTs

Seq: CACXRA010000116.1 uncultured Ruminococcus sp. isolate RUG11516 genome assembly, contig: RUG11516_asm_116, whole genome shotgun sequence (4218 bp)
Overview 1 RT 1: 354-4217 bp Neighborhood of RT #1 [354, 4216] Nudix_Hydrolase RVT-CRISPR cas1_HMARI LapA_dom HTH_LUXR Feature: gene Location: 354-545 bp Feature: gene Location: 608-841 bp Feature: domain Description: Nudix_Hydrolase Location: 671-818 bp Feature: domain Description: Nudix_Hydrolase Location: 671 -81 8 bp Feature: gene Location: 1643-4216 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1844-2423 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 844-2423 bp Feature: domain Description: cas1_HMARI Location: 2570-3512 bp Feature: domain Description: cas1 _HMARI Location: 2570-351 2 bp Feature: domain Description: LapA_dom Location: 3779-3890 bp Feature: domain Description: LapA_dom Location: 3779-3890 bp Feature: domain Description: HTH_LUXR Location: 4121-4217 bp Feature: domain Description: HTH_LUXR Location: 41 21 -421 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase (cl00447), RVT-CRISPR, cas1_HMARI (TIGR03641), LapA_dom (pfam06305), HTH_LUXR (smart00421)