myRT

myRT report for GCA_902770545.1_Rumen_uncultured_genome_RUG11584

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Seq: CACXTR010000031.1 uncultured Clostridiales bacterium isolate RUG11584 genome assembly, contig: RUG11584_asm_31, whole genome shotgun sequence (35375 bp)
Overview 1 RT 1: 17633-21613 bp Neighborhood of RT #1 [17633, 21648] RVT-GII GIIM DraG Feature: gene Location: 17633-17791 bp Feature: gene Location: 18046-18240 bp Feature: gene Location: 18871-20085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18979-19597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8979-1 9597 bp Feature: domain Description: GIIM Note: maturase Location: 19654-19879 bp Feature: domain Description: GIIM Note: maturase Location: 1 9654-1 9879 bp Feature: gene Location: 20736-20990 bp Feature: gene Location: 21121-21648 bp Feature: domain Description: DraG Location: 21136-21613 bp Feature: domain Description: DraG Location: 21 1 36-21 61 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DraG (COG1397)

Seq: CACXTR010000097.1 uncultured Clostridiales bacterium isolate RUG11584 genome assembly, contig: RUG11584_asm_97, whole genome shotgun sequence (25709 bp)
Overview 1 RT 1: 7813-16345 bp Neighborhood of RT #1 [7813, 16407] NHLM_micro_ABC2 NHLM_micro_ABC1 RVT-UG26 Kex1 Feature: gene Location: 7813-9879 bp Feature: domain Description: NHLM_micro_ABC2 Location: 7960-9862 bp Feature: domain Description: NHLM_micro_ABC2 Location: 7960-9862 bp Feature: gene Location: 9980-12124 bp Feature: domain Description: NHLM_micro_ABC1 Location: 9986-12095 bp Feature: domain Description: NHLM_micro_ABC1 Location: 9986-12 095 bp Feature: gene Location: 12559-13860 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 12811-13432 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 12 811-13432 bp Feature: gene Location: 14236-14754 bp Feature: gene Location: 14887-16407 bp Feature: domain Description: Kex1 Location: 14998-16345 bp Feature: domain Description: Kex1 Location: 14998-16345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHLM_micro_ABC2 (TIGR03797), NHLM_micro_ABC1 (TIGR03796), RVT-UG26, Kex1 (COG2939)