myRT

myRT report for GCA_902770805.1_Rumen_uncultured_genome_RUG11605

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Seq: CACXUF010000002.1 uncultured Bacteroidales bacterium isolate RUG11605 genome assembly, contig: RUG11605_asm_2, whole genome shotgun sequence (410364 bp)
Overview 1 RT 1: 301332-305506 bp Neighborhood of RT #1 [301332, 305748] 23S_rRNA_IVP_like AHBA_syn RVT-Retrons Upp Feature: gene Location: 301332-301712 bp Feature: domain Description: 23S_rRNA_IVP_like Location: 301365-301698 bp Feature: domain Description: 23S_rRNA_IVP_like Location: 301 365-301 698 bp Feature: gene Location: 301770-303140 bp Feature: domain Description: AHBA_syn Location: 301827-303117 bp Feature: domain Description: AHBA_syn Location: 301 827-3031 1 7 bp Feature: gene Location: 303170-304222 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 303401-303959 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 303401 -303959 bp Feature: gene Location: 304443-304766 bp Feature: gene Location: 304756-305748 bp Feature: domain Description: Upp Location: 305302-305506 bp Feature: domain Description: Upp Location: 305302-305506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 23S_rRNA_IVP_like (cd16377), AHBA_syn (cd00616), RVT-Retrons, Upp (COG0035)

Seq: CACXUF010000005.1 uncultured Bacteroidales bacterium isolate RUG11605 genome assembly, contig: RUG11605_asm_5, whole genome shotgun sequence (103009 bp)
Overview 1 RT 1: 93801-100707 bp Neighborhood of RT #1 [93801, 100748] RecQ RecQ recJ RVT-UG26 WYL Feature: gene Location: 93801-95732 bp Feature: domain Description: RecQ Location: 93828-94917 bp Feature: domain Description: RecQ Location: 9382 8-94917 bp Feature: domain Description: RecQ Location: 95376-95583 bp Feature: domain Description: RecQ Location: 95376-95583 bp Feature: gene Location: 95771-97504 bp Feature: domain Description: recJ Location: 95855-97475 bp Feature: domain Description: recJ Location: 95855-97475 bp Feature: gene Location: 97825-99063 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 98029-98647 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 9802 9-98647 bp Feature: gene Location: 99217-99738 bp Feature: gene Location: 99825-100748 bp Feature: domain Description: WYL Location: 100182-100707 bp Feature: domain Description: WYL Location: 100182 -100707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecQ (COG0514), recJ (TIGR00644), RVT-UG26, WYL (pfam13280)

Seq: CACXUF010000017.1 uncultured Bacteroidales bacterium isolate RUG11605 genome assembly, contig: RUG11605_asm_17, whole genome shotgun sequence (61966 bp)
Overview 1 RT 1: 44801-51866 bp Neighborhood of RT #1 [44801, 51866] RVT-CRISPR-like Feature: gene Location: 44801-46495 bp Feature: gene Location: 46508-50596 bp Feature: gene Location: 50611-51084 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 50821-51019 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 50821-51019 bp Feature: gene Location: 51447-51638 bp Feature: gene Location: 51660-51866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR