myRT

myRT report for GCA_902771225.1_Rumen_uncultured_genome_RUG11657

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Seq: CACXWH010000029.1 uncultured Methanobrevibacter sp. isolate RUG11657 genome assembly, contig: RUG11657_asm_29, whole genome shotgun sequence (28978 bp)
Overview 1 RT 1: 211-4085 bp Neighborhood of RT #1 [211, 4099] RVT_N RVT-GII GIIM PRK03968 LolD Feature: gene Location: 211-1701 bp Feature: RT Description: RVT_N Location: 268-511 bp Feature: RT Description: RVT_N Location: 268-51 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-1 237 bp Feature: domain Description: GIIM Note: maturase Location: 1300-1534 bp Feature: domain Description: GIIM Note: maturase Location: 1 300-1 534 bp Feature: gene Location: 2576-3907 bp Feature: domain Description: PRK03968 Location: 2579-3893 bp Feature: domain Description: PRK03968 Location: 2579-3893 bp Feature: gene Location: 3908-4099 bp Feature: domain Description: LolD Location: 3911-4085 bp Feature: domain Description: LolD Location: 391 1 -4085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK03968 (DNA primase large subunit PriL), LolD (COG1136)

Seq: CACXWH010000090.1 uncultured Methanobrevibacter sp. isolate RUG11657 genome assembly, contig: RUG11657_asm_90, whole genome shotgun sequence (10512 bp)
Overview 1 RT 1: 6279-9595 bp Neighborhood of RT #1 [6279, 9762] YebA COG1373 RVT_N RVT-GII GIIM Feature: gene Location: 6279-6545 bp Feature: domain Description: YebA Location: 6291-6537 bp Feature: domain Description: YebA Location: 62 91-6537 bp Feature: gene Location: 6646-7845 bp Feature: domain Description: COG1373 Location: 6652-7831 bp Feature: domain Description: COG1373 Location: 6652 -7831 bp Feature: gene Location: 8269-9762 bp Feature: RT Description: RVT_N Location: 8329-8575 bp Feature: RT Description: RVT_N Location: 832 9-8575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8629-9298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862 9-92 98 bp Feature: domain Description: GIIM Note: maturase Location: 9361-9595 bp Feature: domain Description: GIIM Note: maturase Location: 9361-9595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YebA (COG1305), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)