myRT

myRT report for GCA_902771395.1_Rumen_uncultured_genome_RUG11664

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Seq: CACXWN010000006.1 uncultured Prevotellaceae bacterium isolate RUG11664 genome assembly, contig: RUG11664_asm_6, whole genome shotgun sequence (131521 bp)
Overview 1 RT 1: 4837-9402 bp Neighborhood of RT #1 [4837, 9402] HA RVT-Retrons Feature: gene Location: 4837-5070 bp Feature: domain Description: HA Location: 4849-5026 bp Feature: domain Description: HA Location: 4849-5026 bp Feature: gene Location: 5084-6802 bp Feature: gene Location: 7003-8091 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7255-7825 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7255-7825 bp Feature: gene Location: 8160-8582 bp Feature: gene Location: 8551-9402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HA (pfam03457), RVT-Retrons

Seq: CACXWN010000026.1 uncultured Prevotellaceae bacterium isolate RUG11664 genome assembly, contig: RUG11664_asm_26, whole genome shotgun sequence (77688 bp)
Overview 1 RT 1: 43563-48188 bp Neighborhood of RT #1 [43563, 48188] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 43563-43712 bp Feature: gene Location: 43840-44127 bp Feature: domain Description: Cas2_I_II_III Location: 43861-44080 bp Feature: domain Description: Cas2 _I_II_III Location: 43861-44080 bp Feature: gene Location: 44148-46421 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 44358-44973 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 44358-44973 bp Feature: domain Description: Cas1_I-II-III Location: 45429-46386 bp Feature: domain Description: Cas1_I-II-III Location: 4542 9-46386 bp Feature: gene Location: 46427-46900 bp Feature: gene Location: 46887-48188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: CACXWN010000042.1 uncultured Prevotellaceae bacterium isolate RUG11664 genome assembly, contig: RUG11664_asm_42, whole genome shotgun sequence (84191 bp)
Overview 1 RT 1: 48401-53627 bp Neighborhood of RT #1 [48401, 53627] PLDc_Nuc_like_unchar2 RVT-Retrons Feature: gene Location: 48401-49588 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 48407-48809 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 48407-48809 bp Feature: gene Location: 49639-50565 bp Feature: gene Location: 50567-52015 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50768-51383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50768-513 83 bp Feature: gene Location: 52417-52980 bp Feature: gene Location: 53019-53627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_Nuc_like_unchar2 (cd09174), RVT-Retrons