myRT

myRT report for GCA_902771635.1_Rumen_uncultured_genome_RUG11691

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Seq: CACXXW010000045.1 uncultured Bacteroidia bacterium isolate RUG11691 genome assembly, contig: RUG11691_asm_45, whole genome shotgun sequence (13501 bp)
Overview 1 RT 1: 6291-12200 bp Neighborhood of RT #1 [6291, 12200] DEXSc_RecD-like recD_rel RVT-Retrons WG_beta_rep WG_beta_rep Feature: gene Location: 6291-8282 bp Feature: domain Description: DEXSc_RecD-like Location: 6354-6798 bp Feature: domain Description: DEXSc_RecD-like Location: 6354-6798 bp Feature: domain Description: recD_rel Location: 7533-7680 bp Feature: domain Description: recD_rel Location: 7533-7680 bp Feature: gene Location: 8577-9446 bp Feature: gene Location: 9459-10703 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9666-10311 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9666-1 031 1 bp Feature: gene Location: 11086-11613 bp Feature: domain Description: WG_beta_rep Location: 11152-11245 bp Feature: domain Description: WG_beta_rep Location: 1 1 1 52-1 1 245 bp Feature: domain Description: WG_beta_rep Location: 11290-11365 bp Feature: domain Description: WG_beta_rep Location: 1 1 290-1 1 365 bp Feature: gene Location: 11631-12200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXSc_RecD-like (cd17933), recD_rel (TIGR01448), RVT-Retrons, WG_beta_rep (pfam14903)

Seq: CACXXW010000082.1 uncultured Bacteroidia bacterium isolate RUG11691 genome assembly, contig: RUG11691_asm_82, whole genome shotgun sequence (8690 bp)
Overview 1 RT 1: 3259-8682 bp Neighborhood of RT #1 [3259, 8687] DUF2971 RVT-UG15 PRK12767 COG2865 Feature: gene Location: 3259-4284 bp Feature: domain Description: DUF2971 Location: 3562-3799 bp Feature: domain Description: DUF2 971 Location: 3562 -3799 bp Feature: gene Location: 4333-5133 bp Feature: gene Location: 5140-6657 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 5584-5983 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 5584-5983 bp Feature: gene Location: 6915-7160 bp Feature: domain Description: PRK12767 Location: 6999-7098 bp Feature: domain Description: PRK12 767 Location: 6999-7098 bp Feature: gene Location: 7326-8687 bp Feature: domain Description: COG2865 Location: 7332-8682 bp Feature: domain Description: COG2 865 Location: 7332 -8682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2971 (pfam11185), RVT-UG15, PRK12767 (carbamoyl phosphate synthase-like protein; Provisional), COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: CACXXW010000135.1 uncultured Bacteroidia bacterium isolate RUG11691 genome assembly, contig: RUG11691_asm_135, whole genome shotgun sequence (5064 bp)
Overview 1 RT 1: 769-4911 bp Neighborhood of RT #1 [769, 5063] LRR_5 LRR_3 LRR_5 Por_Secre_tail RVT-UG26 LutB Feature: gene Location: 769-2370 bp Feature: domain Description: LRR_5 Location: 1018-1303 bp Feature: domain Description: LRR_5 Location: 1018-13 03 bp Feature: domain Description: LRR_3 Location: 1345-1498 bp Feature: domain Description: LRR_3 Location: 13 45-1498 bp Feature: domain Description: LRR_5 Location: 1522-1819 bp Feature: domain Description: LRR_5 Location: 1522-1819 bp Feature: domain Description: Por_Secre_tail Location: 2167-2359 bp Feature: domain Description: Por_Secre_tail Location: 2167-23 59 bp Feature: gene Location: 2442-2957 bp Feature: gene Location: 3121-4401 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3391-4009 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3 3 91-4009 bp Feature: gene Location: 4440-5063 bp Feature: domain Description: LutB Location: 4452-4911 bp Feature: domain Description: LutB Location: 4452-4911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LRR_5 (pfam13306), LRR_3 (sd00036), Por_Secre_tail (TIGR04183), RVT-UG26, LutB (COG1139)