myRT

myRT report for GCA_902772835.1_Rumen_uncultured_genome_RUG11817

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Seq: CACYCK010000196.1 uncultured Clostridiales bacterium isolate RUG11817 genome assembly, contig: RUG11817_asm_196, whole genome shotgun sequence (2129 bp)
Overview 1 RT 1: 3-2126 bp Neighborhood of RT #1 [3, 2128] RVT-UG3 RVT-UG8 Feature: gene Location: 3-1187 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 159-627 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 59-627 bp Feature: gene Location: 1328-2128 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1850-2126 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 850-21 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8

Seq: CACYCK010000403.1 uncultured Clostridiales bacterium isolate RUG11817 genome assembly, contig: RUG11817_asm_403, whole genome shotgun sequence (4846 bp)
Overview 1 RT 1: 121-2555 bp Neighborhood of RT #1 [121, 3151] RVT-Retrons TIR-like Feature: gene Location: 121-369 bp Feature: gene Location: 389-1255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 575-1085 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 575-1085 bp Feature: gene Location: 1288-2106 bp Feature: gene Location: 2204-3151 bp Feature: domain Description: TIR-like Location: 2216-2555 bp Feature: domain Description: TIR-like Location: 2 2 16-2 555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR-like (pfam10137)

Seq: CACYCK010000416.1 uncultured Clostridiales bacterium isolate RUG11817 genome assembly, contig: RUG11817_asm_416, whole genome shotgun sequence (2208 bp)
Overview 1 RT 1: 3-2023 bp Neighborhood of RT #1 [3, 2205] RVT-UG19 PKc Feature: gene Location: 3-1334 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 252-660 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 252-660 bp Feature: gene Location: 1348-2205 bp Feature: domain Description: PKc Location: 1468-2023 bp Feature: domain Description: PKc Location: 1468-2023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19, PKc (cd00180)

Seq: CACYCK010000462.1 uncultured Clostridiales bacterium isolate RUG11817 genome assembly, contig: RUG11817_asm_462, whole genome shotgun sequence (4124 bp)
Overview 1 RT 1: 127-2527 bp Neighborhood of RT #1 [127, 3699] L1-EN RVT-UNC Feature: gene Location: 127-3699 bp Feature: domain Description: L1-EN Location: 679-1021 bp Feature: domain Description: L1-EN Location: 679-1021 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2002-2527 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2002-2527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII/RVT-CRISPR/RVT-UG11(RVT-UNC)