myRT

myRT report for GCA_902774195.1_Rumen_uncultured_genome_RUG11940

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Seq: CACYHM010000002.1 uncultured Clostridiales bacterium isolate RUG11940 genome assembly, contig: RUG11940_asm_2, whole genome shotgun sequence (21498 bp)
Overview 1 RT 1: 122-6681 bp Neighborhood of RT #1 [122, 6692] PblB RVT-DGRs YomH Feature: gene Location: 122-2572 bp Feature: domain Description: PblB Location: 125-1739 bp Feature: domain Description: PblB Location: 1 25-1 739 bp Feature: gene Location: 2692-3000 bp Feature: gene Location: 2963-4006 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3176-3761 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 76-3761 bp Feature: gene Location: 4335-5858 bp Feature: gene Location: 5877-6692 bp Feature: domain Description: YomH Location: 5895-6681 bp Feature: domain Description: YomH Location: 5895-6681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PblB (COG4926), RVT-DGRs, YomH (COG4722)

Seq: CACYHM010000022.1 uncultured Clostridiales bacterium isolate RUG11940 genome assembly, contig: RUG11940_asm_22, whole genome shotgun sequence (15726 bp)
Overview 1 RT 1: 3797-11723 bp Neighborhood of RT #1 [3797, 11746] Endonuclea_NS_2 EAL COG5001 RVT-UG26 NHLM_micro_ABC1 Feature: gene Location: 3797-4834 bp Feature: domain Description: Endonuclea_NS_2 Location: 4199-4559 bp Feature: domain Description: Endonuclea_NS_2 Location: 4199-4559 bp Feature: gene Location: 5030-7720 bp Feature: domain Description: EAL Location: 5072-5810 bp Feature: domain Description: EAL Location: 5072 -5810 bp Feature: domain Description: COG5001 Location: 7085-7400 bp Feature: domain Description: COG5001 Location: 7085-7400 bp Feature: gene Location: 7720-8988 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 7957-8575 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 7957-8575 bp Feature: gene Location: 9166-9426 bp Feature: gene Location: 9542-11746 bp Feature: domain Description: NHLM_micro_ABC1 Location: 9569-11723 bp Feature: domain Description: NHLM_micro_ABC1 Location: 9569-1172 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endonuclea_NS_2 (pfam13930), EAL (smart00052), COG5001 (Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain ), RVT-UG26, NHLM_micro_ABC1 (TIGR03796)

Seq: CACYHM010000214.1 uncultured Clostridiales bacterium isolate RUG11940 genome assembly, contig: RUG11940_asm_214, whole genome shotgun sequence (4657 bp)
Overview 1 RT 1: 3-3920 bp Neighborhood of RT #1 [3, 4654] RVT-UG26 rSAM_fuse_unch rSAM_fuse_unch Feature: gene Location: 3-314 bp Feature: gene Location: 572-1837 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 782-1391 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 782-13 91 bp Feature: gene Location: 1853-4654 bp Feature: domain Description: rSAM_fuse_unch Location: 2084-3182 bp Feature: domain Description: rSAM_fuse_unch Location: 2084-3 182 bp Feature: domain Description: rSAM_fuse_unch Location: 3185-3920 bp Feature: domain Description: rSAM_fuse_unch Location: 3 185-3 920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, rSAM_fuse_unch (TIGR03960)

Seq: CACYHM010000379.1 uncultured Clostridiales bacterium isolate RUG11940 genome assembly, contig: RUG11940_asm_379, whole genome shotgun sequence (2132 bp)
Overview 1 RT 1: 1-2129 bp Neighborhood of RT #1 [1, 2131] GGDEF RVT-UG26 Feature: gene Location: 1-1332 bp Feature: domain Description: GGDEF Location: 697-1318 bp Feature: domain Description: GGDEF Location: 697-1318 bp Feature: gene Location: 1475-2131 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1709-2129 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1709-2129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GGDEF (TIGR00254), RVT-UG26