myRT

myRT report for GCA_902774915.1_Rumen_uncultured_genome_RUG12023

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Seq: CACYKH010000049.1 uncultured Lachnospiraceae bacterium isolate RUG12023 genome assembly, contig: RUG12023_asm_49, whole genome shotgun sequence (6046 bp)
Overview 1 RT 1: 2-4405 bp Neighborhood of RT #1 [2, 4464] COG4832 RVT-GII GIIM UbiE Transglut_core Acetyltransf_1 Feature: gene Location: 2-229 bp Feature: domain Description: COG4832 Location: 8-221 bp Feature: domain Description: COG4832 Location: 8-221 bp Feature: gene Location: 810-953 bp Feature: gene Location: 987-2405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1338-1959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 338-1 959 bp Feature: domain Description: GIIM Note: maturase Location: 2016-2241 bp Feature: domain Description: GIIM Note: maturase Location: 201 6-2241 bp Feature: gene Location: 2646-3401 bp Feature: domain Description: UbiE Location: 2700-3147 bp Feature: domain Description: UbiE Location: 2700-31 47 bp Feature: gene Location: 3427-4464 bp Feature: domain Description: Transglut_core Location: 3514-3841 bp Feature: domain Description: Transglut_core Location: 351 4-3841 bp Feature: domain Description: Acetyltransf_1 Location: 4150-4405 bp Feature: domain Description: Acetyltransf_1 Location: 41 50-4405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UbiE (COG2226), Transglut_core (pfam01841), Acetyltransf_1 (pfam00583), RVT-GII, GIIM (pfam08388)