myRT

myRT report for GCA_902775165.1_Rumen_uncultured_genome_RUG12041

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Seq: CACYLF010000003.1 uncultured Lachnospiraceae bacterium isolate RUG12041 genome assembly, contig: RUG12041_asm_3, whole genome shotgun sequence (66596 bp)
Overview 1 RT 1: 32848-37810 bp Neighborhood of RT #1 [32848, 37875] RVT-DGRs ABC_trans_CmpB Feature: gene Location: 32848-33360 bp Feature: gene Location: 33448-35016 bp Feature: gene Location: 35431-36783 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35743-36442 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35743-36442 bp Feature: gene Location: 36776-37462 bp Feature: gene Location: 37459-37875 bp Feature: domain Description: ABC_trans_CmpB Location: 37507-37810 bp Feature: domain Description: ABC_trans_CmpB Location: 37507-3781 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ABC_trans_CmpB (pfam06541)

Seq: CACYLF010000110.1 uncultured Lachnospiraceae bacterium isolate RUG12041 genome assembly, contig: RUG12041_asm_110, whole genome shotgun sequence (9989 bp)
Overview 1 RT 1: 7493-9980 bp Neighborhood of RT #1 [7493, 9988] RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 7493-8086 bp Feature: gene Location: 8194-8334 bp Feature: gene Location: 8456-9124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8459-8666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8459-8666 bp Feature: domain Description: GIIM Note: maturase Location: 8726-8954 bp Feature: domain Description: GIIM Note: maturase Location: 872 6-8954 bp Feature: gene Location: 9245-9988 bp Feature: domain Description: Phage_int_SAM_1 Location: 9251-9428 bp Feature: domain Description: Phage_int_SAM_1 Location: 92 51-942 8 bp Feature: domain Description: INT_RitC_C_like Location: 9521-9980 bp Feature: domain Description: INT_RitC_C_like Location: 952 1-9980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)

Seq: CACYLF010000157.1 uncultured Lachnospiraceae bacterium isolate RUG12041 genome assembly, contig: RUG12041_asm_157, whole genome shotgun sequence (3899 bp)
Overview 1 RT 1: 389-3784 bp Neighborhood of RT #1 [389, 3837] Bac_rhamnosid6H Bac_rhamnosid_C RVT-GII Feature: gene Location: 389-2677 bp Feature: domain Description: Bac_rhamnosid6H Location: 1460-2459 bp Feature: domain Description: Bac_rhamnosid6H Location: 1460-2459 bp Feature: domain Description: Bac_rhamnosid_C Location: 2498-2660 bp Feature: domain Description: Bac_rhamnosid_C Location: 2498-2660 bp Feature: gene Location: 3148-3837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3403-3784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 403 -3 784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_rhamnosid6H (pfam17389), Bac_rhamnosid_C (pfam17390), RVT-GII