myRT

myRT report for GCA_902775465.1_Rumen_uncultured_genome_RUG12066

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Seq: CACYMD010000001.1 uncultured Bacteroidia bacterium isolate RUG12066 genome assembly, contig: RUG12066_asm_1, whole genome shotgun sequence (222874 bp)
Overview 1 RT 1: 24366-32734 bp Neighborhood of RT #1 [24366, 32826] KOG2237 RVT-Retrons PRK05559 MATE_Wzx_like Feature: gene Location: 24366-24854 bp Feature: gene Location: 24926-27070 bp Feature: domain Description: KOG2237 Location: 25013-27044 bp Feature: domain Description: KOG2237 Location: 2501 3-27044 bp Feature: gene Location: 27519-29366 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27690-28257 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27690-28257 bp Feature: gene Location: 29567-31495 bp Feature: domain Description: PRK05559 Location: 29627-31472 bp Feature: domain Description: PRK05559 Location: 29627-31 472 bp Feature: gene Location: 31531-32826 bp Feature: domain Description: MATE_Wzx_like Location: 31555-32734 bp Feature: domain Description: MATE_Wzx_like Location: 31 555-32734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2237 (KOG2237, Predicted serine protease ), RVT-Retrons, PRK05559 (DNA topoisomerase IV subunit B; Reviewed), MATE_Wzx_like (cd13128)

Seq: CACYMD010000002.1 uncultured Bacteroidia bacterium isolate RUG12066 genome assembly, contig: RUG12066_asm_2, whole genome shotgun sequence (193177 bp)
Overview 1 RT 1: 128646-134710 bp Neighborhood of RT #1 [128646, 134745] LacAB_rpiB LutB RVT-UG26 PRK12740 Feature: gene Location: 128646-129101 bp Feature: domain Description: LacAB_rpiB Location: 128661-129072 bp Feature: domain Description: LacAB_rpiB Location: 12 8661-12 9072 bp Feature: gene Location: 129094-130458 bp Feature: domain Description: LutB Location: 129124-130327 bp Feature: domain Description: LutB Location: 12 912 4-13032 7 bp Feature: gene Location: 130514-131731 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 130721-131339 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 13072 1-131339 bp Feature: gene Location: 131963-132466 bp Feature: gene Location: 132610-134745 bp Feature: domain Description: PRK12740 Location: 132655-134710 bp Feature: domain Description: PRK12 740 Location: 132 655-134710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacAB_rpiB (pfam02502), LutB (COG1139), RVT-UG26, PRK12740 (elongation factor G-like protein EF-G2)

Seq: CACYMD010000009.1 uncultured Bacteroidia bacterium isolate RUG12066 genome assembly, contig: RUG12066_asm_9, whole genome shotgun sequence (315709 bp)
Overview 1 RT 1: 158250-164638 bp Neighborhood of RT #1 [158250, 164638] VbhA_like FIDO COG3177 RVT-AbiP2 Feature: gene Location: 158250-159404 bp Feature: domain Description: VbhA_like Location: 158304-158460 bp Feature: domain Description: VbhA_like Location: 1583 04-158460 bp Feature: domain Description: FIDO Location: 158478-159024 bp Feature: domain Description: FIDO Location: 158478-159024 bp Feature: gene Location: 159490-160509 bp Feature: domain Description: COG3177 Location: 159532-160480 bp Feature: domain Description: COG3 177 Location: 15953 2-160480 bp Feature: gene Location: 160640-162145 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 161066-161543 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 161066-161543 bp Feature: gene Location: 162554-163585 bp Feature: gene Location: 163886-164638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VbhA_like (cl17006), FIDO (COG2184), COG3177 (Fic family protein ), RVT-AbiP2