myRT

myRT report for GCA_902775555.1_Rumen_uncultured_genome_RUG12082

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Seq: CACYMQ010000026.1 uncultured Lachnospiraceae bacterium isolate RUG12082 genome assembly, contig: RUG12082_asm_26, whole genome shotgun sequence (30228 bp)
Overview 1 RT 1: 162-4084 bp Neighborhood of RT #1 [162, 4101] RVT-GII GIIM OmpR HK_WalK TMAO_torS Feature: gene Location: 162-296 bp Feature: gene Location: 310-1719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-1282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661 -1 282 bp Feature: domain Description: GIIM Note: maturase Location: 1330-1543 bp Feature: domain Description: GIIM Note: maturase Location: 1 330-1 543 bp Feature: gene Location: 1903-2610 bp Feature: domain Description: OmpR Location: 1918-2605 bp Feature: domain Description: OmpR Location: 1 91 8-2605 bp Feature: gene Location: 2614-4101 bp Feature: domain Description: HK_WalK Location: 2623-3388 bp Feature: domain Description: HK_WalK Location: 2623-3388 bp Feature: domain Description: TMAO_torS Location: 3409-4084 bp Feature: domain Description: TMAO_torS Location: 3409-4084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), OmpR (COG0745), HK_WalK (NF033092), TMAO_torS (TIGR02956)

Seq: CACYMQ010000033.1 uncultured Lachnospiraceae bacterium isolate RUG12082 genome assembly, contig: RUG12082_asm_33, whole genome shotgun sequence (47660 bp)
Overview 1 RT 1: 32976-40047 bp Neighborhood of RT #1 [32976, 40058] RVT-UG26 NHLM_micro_ABC2 NHLM_micro_ABC1 Feature: gene Location: 32976-33311 bp Feature: gene Location: 33460-34335 bp Feature: gene Location: 34473-35684 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 34674-35289 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 34674-352 89 bp Feature: gene Location: 35689-37866 bp Feature: domain Description: NHLM_micro_ABC2 Location: 35977-37849 bp Feature: domain Description: NHLM_micro_ABC2 Location: 35977-37849 bp Feature: gene Location: 37878-40058 bp Feature: domain Description: NHLM_micro_ABC1 Location: 37917-40047 bp Feature: domain Description: NHLM_micro_ABC1 Location: 37917-40047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, NHLM_micro_ABC2 (TIGR03797), NHLM_micro_ABC1 (TIGR03796)