myRT

myRT report for GCA_902775595.1_Rumen_uncultured_genome_RUG12088

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Seq: CACYNF010000066.1 uncultured bacterium isolate RUG12088 genome assembly, contig: RUG12088_asm_66, whole genome shotgun sequence (15536 bp)
Overview 1 RT 1: 4863-15447 bp Neighborhood of RT #1 [4863, 15447] PepD COG1373 RVT-GII GIIM DUF2341 Laminin_G_3 Feature: gene Location: 4863-6020 bp Feature: domain Description: PepD Location: 4911-5763 bp Feature: domain Description: PepD Location: 491 1 -5763 bp Feature: gene Location: 6143-7321 bp Feature: domain Description: COG1373 Location: 6194-7253 bp Feature: domain Description: COG1 373 Location: 61 94-7253 bp Feature: gene Location: 7683-9338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8313-8961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831 3-8961 bp Feature: domain Description: GIIM Note: maturase Location: 9036-9249 bp Feature: domain Description: GIIM Note: maturase Location: 9036-9249 bp Feature: gene Location: 9406-13299 bp Feature: domain Description: DUF2341 Location: 9745-9901 bp Feature: domain Description: DUF2341 Location: 9745-9901 bp Feature: domain Description: Laminin_G_3 Location: 10123-10573 bp Feature: domain Description: Laminin_G_3 Location: 1 01 23-1 0573 bp Feature: gene Location: 13546-15447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepD (COG4690), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII, GIIM (pfam08388), DUF2341 (pfam10102), Laminin_G_3 (pfam13385)