myRT

myRT report for GCA_902776125.1_Rumen_uncultured_genome_RUG12138

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Seq: CACYOX010000005.1 uncultured bacterium isolate RUG12138 genome assembly, contig: RUG12138_asm_5, whole genome shotgun sequence (94996 bp)
Overview 1 RT 1: 51109-55351 bp Neighborhood of RT #1 [51109, 55351] RVT-DGRs Feature: gene Location: 51109-52665 bp Feature: gene Location: 52717-52974 bp Feature: gene Location: 53180-54448 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53408-54062 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53408-54062 bp Feature: gene Location: 54313-54840 bp Feature: gene Location: 55019-55351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CACYOX010000011.1 uncultured bacterium isolate RUG12138 genome assembly, contig: RUG12138_asm_11, whole genome shotgun sequence (104803 bp)
Overview 1 RT 1: 64079-74559 bp Neighborhood of RT #1 [64079, 74559] Recombinase SIR2_2 TPR TPR CSD RVT-Retrons Feature: gene Location: 64079-65077 bp Feature: domain Description: Recombinase Location: 64088-64277 bp Feature: domain Description: Recombinase Location: 64088-642 77 bp Feature: gene Location: 65120-68230 bp Feature: domain Description: SIR2_2 Location: 65453-65873 bp Feature: domain Description: SIR2 _2 Location: 65453-65873 bp Feature: domain Description: TPR Location: 67127-67346 bp Feature: domain Description: TPR Location: 6712 7-67346 bp Feature: domain Description: TPR Location: 67595-67838 bp Feature: domain Description: TPR Location: 67595-67838 bp Feature: domain Description: CSD Location: 68054-68222 bp Feature: domain Description: CSD Location: 68054-682 2 2 bp Feature: gene Location: 68751-69839 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68985-69567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68985-69567 bp Feature: gene Location: 69902-70780 bp Feature: gene Location: 70861-74559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Recombinase (pfam07508), SIR2_2 (pfam13289), TPR (smart00028), CSD (pfam00313), RVT-Retrons