myRT

myRT report for GCA_902776545.1_Rumen_uncultured_genome_RUG12181

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Seq: CACYQO010000061.1 uncultured Prevotellaceae bacterium isolate RUG12181 genome assembly, contig: RUG12181_asm_61, whole genome shotgun sequence (52196 bp)
Overview 1 RT 1: 38635-42725 bp Neighborhood of RT #1 [38635, 42725] DraG RVT_N RVT-GII YkfC Feature: gene Location: 38635-39657 bp Feature: gene Location: 39762-40559 bp Feature: domain Description: DraG Location: 39765-40518 bp Feature: domain Description: DraG Location: 39765-4051 8 bp Feature: gene Location: 40700-42202 bp Feature: RT Description: RVT_N Location: 40766-41009 bp Feature: RT Description: RVT_N Location: 40766-41 009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41054-41696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 054-41 696 bp Feature: domain Description: YkfC Location: 41909-42044 bp Feature: domain Description: YkfC Location: 41 909-42044 bp Feature: gene Location: 42229-42426 bp Feature: gene Location: 42459-42725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DraG (COG1397), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: CACYQO010000068.1 uncultured Prevotellaceae bacterium isolate RUG12181 genome assembly, contig: RUG12181_asm_68, whole genome shotgun sequence (31623 bp)
Overview 1 RT 1: 1-4080 bp Neighborhood of RT #1 [1, 4109] RVT-GII GIIM PRK00955 Feature: gene Location: 1-795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-340 bp Feature: domain Description: GIIM Note: maturase Location: 400-604 bp Feature: domain Description: GIIM Note: maturase Location: 400-604 bp Feature: gene Location: 1247-2113 bp Feature: gene Location: 2037-4109 bp Feature: domain Description: PRK00955 Location: 2193-4080 bp Feature: domain Description: PRK00955 Location: 2 193-4080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK00955 (YgiQ family radical SAM protein)