myRT

myRT report for GCA_902776965.1_Rumen_uncultured_genome_RUG12226

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Seq: CACYSK010000041.1 uncultured Ruminococcus sp. isolate RUG12226 genome assembly, contig: RUG12226_asm_41, whole genome shotgun sequence (14869 bp)
Overview 1 RT 1: 1-2734 bp Neighborhood of RT #1 [1, 2952] RVT-GII GIIM AAA_21 Feature: gene Location: 1-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-1 06 bp Feature: domain Description: GIIM Note: maturase Location: 163-394 bp Feature: domain Description: GIIM Note: maturase Location: 1 63-394 bp Feature: gene Location: 689-1462 bp Feature: gene Location: 1465-2952 bp Feature: domain Description: AAA_21 Location: 1660-2734 bp Feature: domain Description: AAA_21 Location: 1 660-2734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-GII, GIIM (pfam08388)

Seq: CACYSK010000179.1 uncultured Ruminococcus sp. isolate RUG12226 genome assembly, contig: RUG12226_asm_179, whole genome shotgun sequence (2726 bp)
Overview 1 RT 1: 1-2724 bp Neighborhood of RT #1 [1, 2723] DUF4096 RVT-GII CAP_ED LDH_2 Feature: gene Location: 1-390 bp Feature: domain Description: DUF4096 Location: 16-214 bp Feature: domain Description: DUF4096 Location: 16-2 14 bp Feature: gene Location: 997-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1318-1606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1318-1606 bp Feature: gene Location: 1790-2155 bp Feature: domain Description: CAP_ED Location: 1871-2144 bp Feature: domain Description: CAP_ED Location: 1871-2 144 bp Feature: gene Location: 2262-2723 bp Feature: domain Description: LDH_2 Location: 2286-2724 bp Feature: domain Description: LDH_2 Location: 2 2 86-2 72 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), CAP_ED (cl00047), LDH_2 (cd05292), RVT-GII