myRT

myRT report for GCA_902777235.1_Rumen_uncultured_genome_RUG12244

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Seq: CACYSY010000007.1 uncultured Lachnospiraceae bacterium isolate RUG12244 genome assembly, contig: RUG12244_asm_7, whole genome shotgun sequence (123800 bp)
Overview 1 RT 1: 119458-122843 bp Neighborhood of RT #1 [119458, 123406] MobC RVT-GII GIIM COG4584 Feature: gene Location: 119458-119637 bp Feature: gene Location: 119642-120136 bp Feature: domain Description: MobC Location: 119969-120101 bp Feature: domain Description: MobC Location: 1 1 9969-1 201 01 bp Feature: gene Location: 120234-121526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120444-121059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20444-1 21 059 bp Feature: domain Description: GIIM Note: maturase Location: 121119-121335 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 1 1 9-1 21 335 bp Feature: gene Location: 121672-121899 bp Feature: gene Location: 121946-123406 bp Feature: domain Description: COG4584 Location: 122123-122843 bp Feature: domain Description: COG4584 Location: 1 221 23-1 22843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), RVT-GII, GIIM (pfam08388), COG4584 (Transposase )

Seq: CACYSY010000132.1 uncultured Lachnospiraceae bacterium isolate RUG12244 genome assembly, contig: RUG12244_asm_132, whole genome shotgun sequence (4038 bp)
Overview 1 RT 1: 1248-3785 bp Neighborhood of RT #1 [1248, 3967] GlnQ RVT-GII GIIM Feature: gene Location: 1248-2003 bp Feature: domain Description: GlnQ Location: 1281-1989 bp Feature: domain Description: GlnQ Location: 12 81-1989 bp Feature: gene Location: 2388-2516 bp Feature: gene Location: 2576-3967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2891-3515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 891-3515 bp Feature: domain Description: GIIM Note: maturase Location: 3572-3785 bp Feature: domain Description: GIIM Note: maturase Location: 3572 -3785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnQ (COG1126), RVT-GII, GIIM (pfam08388)

Seq: CACYSY010000160.1 uncultured Lachnospiraceae bacterium isolate RUG12244 genome assembly, contig: RUG12244_asm_160, whole genome shotgun sequence (3345 bp)
Overview 1 RT 1: 155-3343 bp Neighborhood of RT #1 [155, 3343] WYL YkfC RVT-GII GIIM Feature: gene Location: 155-343 bp Feature: gene Location: 529-1512 bp Feature: domain Description: WYL Location: 952-1495 bp Feature: domain Description: WYL Location: 952-1495 bp Feature: gene Location: 1584-2927 bp Feature: domain Description: YkfC Location: 1710-1839 bp Feature: domain Description: YkfC Location: 1710-183 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1854-2457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1854-2457 bp Feature: domain Description: GIIM Note: maturase Location: 2514-2730 bp Feature: domain Description: GIIM Note: maturase Location: 2514-273 0 bp Feature: gene Location: 2980-3120 bp Feature: gene Location: 3203-3343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, GIIM (pfam08388), WYL (pfam13280)