myRT

myRT report for GCA_902777315.1_Rumen_uncultured_genome_RUG12260

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Seq: CACYTK010000014.1 uncultured Succiniclasticum sp. isolate RUG12260 genome assembly, contig: RUG12260_asm_14, whole genome shotgun sequence (13489 bp)
Overview 1 RT 1: 368-3487 bp Neighborhood of RT #1 [368, 3681] RVT-GII GIIM SLH gram_neg_porins Feature: gene Location: 368-1750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680-1304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680-1 304 bp Feature: domain Description: GIIM Note: maturase Location: 1358-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1 358-1 589 bp Feature: gene Location: 1825-2058 bp Feature: gene Location: 2293-3681 bp Feature: domain Description: SLH Location: 2503-2632 bp Feature: domain Description: SLH Location: 2503-2632 bp Feature: domain Description: gram_neg_porins Location: 3133-3487 bp Feature: domain Description: gram_neg_porins Location: 31 33-3487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLH (pfam00395), gram_neg_porins (cd00342), RVT-GII, GIIM (pfam08388)

Seq: CACYTK010000207.1 uncultured Succiniclasticum sp. isolate RUG12260 genome assembly, contig: RUG12260_asm_207, whole genome shotgun sequence (7086 bp)
Overview 1 RT 1: 3722-7054 bp Neighborhood of RT #1 [3722, 7083] nadD RVT-GII GIIM EAL Feature: gene Location: 3722-4390 bp Feature: domain Description: nadD Location: 3752-4352 bp Feature: domain Description: nadD Location: 3752 -4352 bp Feature: gene Location: 4637-4936 bp Feature: gene Location: 5037-6320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5241-5856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 41-5856 bp Feature: domain Description: GIIM Note: maturase Location: 5922-6147 bp Feature: domain Description: GIIM Note: maturase Location: 592 2 -6147 bp Feature: gene Location: 6432-6593 bp Feature: gene Location: 6931-7083 bp Feature: domain Description: EAL Location: 6934-7054 bp Feature: domain Description: EAL Location: 6934-7054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nadD (PRK07152), RVT-GII, GIIM (pfam08388), EAL (smart00052)