myRT

myRT report for GCA_902777335.1_Rumen_uncultured_genome_RUG12259

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Seq: CACYTF010000014.1 uncultured Clostridiales bacterium isolate RUG12259 genome assembly, contig: RUG12259_asm_14, whole genome shotgun sequence (56062 bp)
Overview 1 RT 1: 44894-54167 bp Neighborhood of RT #1 [44894, 54172] COG2865 recQ RVT-UG5 nitrilase Acetyltransf_1 COG2509 Feature: gene Location: 44894-46372 bp Feature: domain Description: COG2865 Location: 44903-46349 bp Feature: domain Description: COG2865 Location: 44903-46349 bp Feature: gene Location: 46428-48266 bp Feature: domain Description: recQ Location: 46443-48243 bp Feature: domain Description: recQ Location: 46443-48243 bp Feature: gene Location: 48263-51430 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 48749-49220 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 48749-49220 bp Feature: domain Description: nitrilase Location: 50609-51284 bp Feature: domain Description: nitrilase Location: 50609-51 284 bp Feature: gene Location: 52248-52781 bp Feature: domain Description: Acetyltransf_1 Location: 52395-52692 bp Feature: domain Description: Acetyltransf_1 Location: 52395-52692 bp Feature: gene Location: 52796-54172 bp Feature: domain Description: COG2509 Location: 52802-54167 bp Feature: domain Description: COG2509 Location: 52802-541 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), recQ (TIGR01389), RVT-UG5, nitrilase (cl11424), Acetyltransf_1 (pfam00583), COG2509 (FAD-dependent dehydrogenase )

Seq: CACYTF010000088.1 uncultured Clostridiales bacterium isolate RUG12259 genome assembly, contig: RUG12259_asm_88, whole genome shotgun sequence (6727 bp)
Overview 1 RT 1: 2266-6651 bp Neighborhood of RT #1 [2266, 6651] ComEC LTD RVT-GII GIIM TnpV Feature: gene Location: 2266-3486 bp Feature: domain Description: ComEC Location: 2341-3106 bp Feature: domain Description: ComEC Location: 2 341-3106 bp Feature: domain Description: LTD Location: 3190-3469 bp Feature: domain Description: LTD Location: 3190-3469 bp Feature: gene Location: 3618-3794 bp Feature: gene Location: 4003-5442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4327-4951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432 7-4951 bp Feature: domain Description: GIIM Note: maturase Location: 5005-5215 bp Feature: domain Description: GIIM Note: maturase Location: 5005-52 15 bp Feature: gene Location: 5502-5948 bp Feature: domain Description: TnpV Location: 5637-5937 bp Feature: domain Description: TnpV Location: 5637-5937 bp Feature: gene Location: 6193-6651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComEC (COG2333), LTD (pfam00932), RVT-GII, GIIM (pfam08388), TnpV (pfam14198)