myRT

myRT report for GCA_902777635.1_Rumen_uncultured_genome_RUG12285

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Seq: CACYUL010000040.1 uncultured Prevotellaceae bacterium isolate RUG12285 genome assembly, contig: RUG12285_asm_40, whole genome shotgun sequence (21042 bp)
Overview 1 RT 1: 15944-20514 bp Neighborhood of RT #1 [15944, 20933] LacZ LacZ RVT-UG26 Feature: gene Location: 15944-18907 bp Feature: domain Description: LacZ Location: 16271-16463 bp Feature: domain Description: LacZ Location: 1 6271 -1 6463 bp Feature: domain Description: LacZ Location: 16850-17354 bp Feature: domain Description: LacZ Location: 1 6850-1 7354 bp Feature: gene Location: 19014-19529 bp Feature: gene Location: 19695-20933 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 19896-20514 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1 9896-2051 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacZ (COG3250), RVT-UG26

Seq: CACYUL010000300.1 uncultured Prevotellaceae bacterium isolate RUG12285 genome assembly, contig: RUG12285_asm_300, whole genome shotgun sequence (2850 bp)
Overview 1 RT 1: 611-2678 bp Neighborhood of RT #1 [611, 2731] NigD_N NigD_C LPLAT_DHAPAT-like RVT-GII Feature: gene Location: 611-1216 bp Feature: domain Description: NigD_N Location: 731-881 bp Feature: domain Description: NigD_N Location: 731-881 bp Feature: domain Description: NigD_C Location: 944-1181 bp Feature: domain Description: NigD_C Location: 944-1181 bp Feature: gene Location: 1258-2388 bp Feature: domain Description: LPLAT_DHAPAT-like Location: 1537-1939 bp Feature: domain Description: LPLAT_DHAPAT-like Location: 1537-1939 bp Feature: gene Location: 2456-2731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2459-2678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 459-2 678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NigD_N (pfam12667), NigD_C (pfam17415), LPLAT_DHAPAT-like (cd07993), RVT-GII