myRT

myRT report for GCA_902778425.1_Rumen_uncultured_genome_RUG12368

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Seq: CACYXS010000011.1 uncultured Prevotellaceae bacterium isolate RUG12368 genome assembly, contig: RUG12368_asm_11, whole genome shotgun sequence (100663 bp)
Overview 1 RT 1: 37122-41627 bp Neighborhood of RT #1 [37122, 41644] DUF4424 DUF4424 YARHG DUF4359 RVT-UG26 LolD Feature: gene Location: 37122-38192 bp Feature: domain Description: DUF4424 Location: 37188-37467 bp Feature: domain Description: DUF4424 Location: 371 88-37467 bp Feature: domain Description: DUF4424 Location: 37536-37728 bp Feature: domain Description: DUF4424 Location: 37536-37728 bp Feature: domain Description: YARHG Location: 38031-38166 bp Feature: domain Description: YARHG Location: 38031 -381 66 bp Feature: gene Location: 38226-38825 bp Feature: domain Description: DUF4359 Location: 38271-38547 bp Feature: domain Description: DUF4359 Location: 38271 -38547 bp Feature: gene Location: 38891-40126 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 39092-39710 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 39092-3971 0 bp Feature: gene Location: 40278-40796 bp Feature: gene Location: 40970-41644 bp Feature: domain Description: LolD Location: 40973-41627 bp Feature: domain Description: LolD Location: 40973-41 627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4424 (pfam14415), YARHG (pfam13308), DUF4359 (pfam14271), RVT-UG26, LolD (COG1136)

Seq: CACYXS010000012.1 uncultured Prevotellaceae bacterium isolate RUG12368 genome assembly, contig: RUG12368_asm_12, whole genome shotgun sequence (77828 bp)
Overview 1 RT 1: 23689-28453 bp Neighborhood of RT #1 [23689, 28461] RVT-AbiP2 SlpA AroC Feature: gene Location: 23689-24048 bp Feature: gene Location: 24640-24774 bp Feature: gene Location: 24962-26647 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 25397-25853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 5397-2 5853 bp Feature: gene Location: 26787-27368 bp Feature: domain Description: SlpA Location: 26790-27279 bp Feature: domain Description: SlpA Location: 2 6790-2 72 79 bp Feature: gene Location: 27385-28461 bp Feature: domain Description: AroC Location: 27391-28453 bp Feature: domain Description: AroC Location: 2 7391-2 8453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, SlpA (COG1047), AroC (COG0082)

Seq: CACYXS010000022.1 uncultured Prevotellaceae bacterium isolate RUG12368 genome assembly, contig: RUG12368_asm_22, whole genome shotgun sequence (42480 bp)
Overview 1 RT 1: 29983-31683 bp Neighborhood of RT #1 [29983, 31683] RVT-GII GIIM Feature: gene Location: 29983-30180 bp Feature: gene Location: 30400-30549 bp Feature: gene Location: 30591-31190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30921-31131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0921-3 113 1 bp Feature: gene Location: 31208-31447 bp Feature: domain Description: GIIM Note: maturase Location: 31235-31373 bp Feature: domain Description: GIIM Note: maturase Location: 3 123 5-3 13 73 bp Feature: gene Location: 31525-31683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)