myRT

myRT report for GCA_902778595.1_Rumen_uncultured_genome_RUG12381

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Seq: CACYYJ010000033.1 uncultured Clostridiales bacterium isolate RUG12381 genome assembly, contig: RUG12381_asm_33, whole genome shotgun sequence (4907 bp)
Overview 1 RT 1: 247-4802 bp Neighborhood of RT #1 [247, 4807] Phage_int_SAM_3 INT_ICEBs1_C_like TnpV RVT-GII GIIM Cass2 Feature: gene Location: 247-1437 bp Feature: domain Description: Phage_int_SAM_3 Location: 445-610 bp Feature: domain Description: Phage_int_SAM_3 Location: 445-61 0 bp Feature: domain Description: INT_ICEBs1_C_like Location: 784-1432 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 784-1 432 bp Feature: gene Location: 1489-1878 bp Feature: domain Description: TnpV Location: 1540-1846 bp Feature: domain Description: TnpV Location: 1 540-1 846 bp Feature: gene Location: 2357-3601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2561-3218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2561 -321 8 bp Feature: domain Description: GIIM Note: maturase Location: 3299-3515 bp Feature: domain Description: GIIM Note: maturase Location: 3299-351 5 bp Feature: gene Location: 3724-4002 bp Feature: gene Location: 4343-4807 bp Feature: domain Description: Cass2 Location: 4355-4802 bp Feature: domain Description: Cass2 Location: 4355-4802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), RVT-GII, GIIM (pfam08388), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), Cass2 (pfam14526)