myRT

myRT report for GCA_902779355.1_Rumen_uncultured_genome_RUG12461

Download annotations/find similar RTs

Seq: CACZBF010000001.1 uncultured Lachnospiraceae bacterium isolate RUG12461 genome assembly, contig: RUG12461_asm_1, whole genome shotgun sequence (258580 bp)
Overview 1 RT 1: 145402-152883 bp Neighborhood of RT #1 [145402, 152897] Cas2_I_II_III RVT-CRISPR cas1_HMARI Peptidase_M90 Feature: gene Location: 145402-145644 bp Feature: gene Location: 145958-146170 bp Feature: domain Description: Cas2_I_II_III Location: 145961-146144 bp Feature: domain Description: Cas2_I_II_III Location: 1 45961 -1 461 44 bp Feature: gene Location: 146258-148174 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 146480-147047 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 46480-1 47047 bp Feature: domain Description: cas1_HMARI Location: 147188-148163 bp Feature: domain Description: cas1 _HMARI Location: 1 471 88-1 481 63 bp Feature: gene Location: 148199-152131 bp Feature: gene Location: 152199-152897 bp Feature: domain Description: Peptidase_M90 Location: 152583-152883 bp Feature: domain Description: Peptidase_M90 Location: 1 52583-1 52883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641), Peptidase_M90 (pfam06167)

Seq: CACZBF010000019.1 uncultured Lachnospiraceae bacterium isolate RUG12461 genome assembly, contig: RUG12461_asm_19, whole genome shotgun sequence (40252 bp)
Overview 1 RT 1: 14241-20894 bp Neighborhood of RT #1 [14241, 20947] NHLM_micro_ABC2 NHLM_micro_ABC1 RVT-UG26 RhaT Feature: gene Location: 14241-16406 bp Feature: domain Description: NHLM_micro_ABC2 Location: 14517-16401 bp Feature: domain Description: NHLM_micro_ABC2 Location: 14517-16401 bp Feature: gene Location: 16440-18578 bp Feature: domain Description: NHLM_micro_ABC1 Location: 16446-18570 bp Feature: domain Description: NHLM_micro_ABC1 Location: 16446-18570 bp Feature: gene Location: 18601-19818 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 18802-19417 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 18802 -19417 bp Feature: gene Location: 19855-20022 bp Feature: gene Location: 20063-20947 bp Feature: domain Description: RhaT Location: 20066-20894 bp Feature: domain Description: RhaT Location: 2 0066-2 0894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHLM_micro_ABC2 (TIGR03797), NHLM_micro_ABC1 (TIGR03796), RVT-UG26, RhaT (TIGR00776)