myRT

myRT report for GCA_902779395.1_Rumen_uncultured_genome_RUG12463

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Seq: CACZBK010000018.1 uncultured Lachnospiraceae bacterium isolate RUG12463 genome assembly, contig: RUG12463_asm_18, whole genome shotgun sequence (60491 bp)
Overview 1 RT 1: 1019-8622 bp Neighborhood of RT #1 [1019, 8627] Cthe_2159 Cthe_2159 Cthe_2159 Flg_new RVT-UG26 PaaK ACTx2 Feature: gene Location: 1019-4744 bp Feature: domain Description: Cthe_2159 Location: 1619-2075 bp Feature: domain Description: Cthe_21 59 Location: 1 61 9-2075 bp Feature: domain Description: Cthe_2159 Location: 2345-2909 bp Feature: domain Description: Cthe_21 59 Location: 2345-2909 bp Feature: domain Description: Cthe_2159 Location: 2939-3479 bp Feature: domain Description: Cthe_21 59 Location: 2939-3479 bp Feature: domain Description: Flg_new Location: 3596-3785 bp Feature: domain Description: Flg_new Location: 3596-3785 bp Feature: gene Location: 4895-5377 bp Feature: gene Location: 5550-6758 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5751-6369 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5751 -6369 bp Feature: gene Location: 6826-8157 bp Feature: domain Description: PaaK Location: 6877-8152 bp Feature: domain Description: PaaK Location: 6877-81 52 bp Feature: gene Location: 8193-8627 bp Feature: domain Description: ACTx2 Location: 8196-8622 bp Feature: domain Description: ACTx2 Location: 81 96-8622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cthe_2159 (pfam14262), Flg_new (pfam09479), RVT-UG26, PaaK (COG1541), ACTx2 (COG4747)

Seq: CACZBK010000027.1 uncultured Lachnospiraceae bacterium isolate RUG12463 genome assembly, contig: RUG12463_asm_27, whole genome shotgun sequence (40436 bp)
Overview 1 RT 1: 9242-14228 bp Neighborhood of RT #1 [9242, 14228] COG1373 ATPase_2 RVT-GII GIIM Feature: gene Location: 9242-10690 bp Feature: domain Description: COG1373 Location: 9341-10517 bp Feature: domain Description: COG1373 Location: 9341-10517 bp Feature: gene Location: 10841-11872 bp Feature: domain Description: ATPase_2 Location: 10961-11303 bp Feature: domain Description: ATPase_2 Location: 10961-11303 bp Feature: gene Location: 12129-13538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12480-13101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 480-13101 bp Feature: domain Description: GIIM Note: maturase Location: 13149-13362 bp Feature: domain Description: GIIM Note: maturase Location: 13149-13362 bp Feature: gene Location: 13573-13779 bp Feature: gene Location: 13992-14228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), ATPase_2 (pfam01637), RVT-GII, GIIM (pfam08388)