myRT

myRT report for GCA_902780635.1_Rumen_uncultured_genome_RUG12596

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Seq: CACZGH010000018.1 uncultured Prevotellaceae bacterium isolate RUG12596 genome assembly, contig: RUG12596_asm_18, whole genome shotgun sequence (102203 bp)
Overview 1 RT 1: 49822-56493 bp Neighborhood of RT #1 [49822, 56603] YfmG HRDC RVT-DGRs COG3291 GanA GanA DUF5597 Feature: gene Location: 49822-51696 bp Feature: domain Description: YfmG Location: 50932-51691 bp Feature: domain Description: YfmG Location: 50932-51 691 bp Feature: gene Location: 51821-52318 bp Feature: domain Description: HRDC Location: 52061-52247 bp Feature: domain Description: HRDC Location: 52061 -52247 bp Feature: gene Location: 52263-53264 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52473-53058 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52473-53058 bp Feature: gene Location: 53714-54838 bp Feature: domain Description: COG3291 Location: 54611-54764 bp Feature: domain Description: COG3291 Location: 5461 1 -54764 bp Feature: gene Location: 54843-56603 bp Feature: domain Description: GanA Location: 55017-55212 bp Feature: domain Description: GanA Location: 5501 7-5521 2 bp Feature: domain Description: GanA Location: 55212-55917 bp Feature: domain Description: GanA Location: 5521 2-5591 7 bp Feature: domain Description: DUF5597 Location: 56124-56493 bp Feature: domain Description: DUF5597 Location: 561 24-56493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), HRDC (smart00341), RVT-DGRs, COG3291 (PKD repeat ), GanA (COG1874), DUF5597 (pfam18120)

Seq: CACZGH010000019.1 uncultured Prevotellaceae bacterium isolate RUG12596 genome assembly, contig: RUG12596_asm_19, whole genome shotgun sequence (74745 bp)
Overview 1 RT 1: 57-7038 bp Neighborhood of RT #1 [57, 7235] RVT_N RVT-GII GIIM CBM_48 Fes PRK12316 A_NRPS_SidN3_like PP-binding SDR_e1 Feature: gene Location: 57-1586 bp Feature: RT Description: RVT_N Location: 126-369 bp Feature: RT Description: RVT_N Location: 12 6-369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414-1068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414-1068 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1356 bp Feature: domain Description: GIIM Note: maturase Location: 112 2 -1356 bp Feature: gene Location: 1759-2919 bp Feature: domain Description: CBM_48 Location: 1870-2050 bp Feature: domain Description: CBM_48 Location: 1870-2 050 bp Feature: domain Description: Fes Location: 2053-2914 bp Feature: domain Description: Fes Location: 2 053-2 914 bp Feature: gene Location: 3162-7235 bp Feature: domain Description: PRK12316 Location: 3180-4740 bp Feature: domain Description: PRK12 316 Location: 3180-4740 bp Feature: domain Description: A_NRPS_SidN3_like Location: 4827-5856 bp Feature: domain Description: A_NRPS_SidN3_like Location: 482 7-5856 bp Feature: domain Description: PP-binding Location: 5919-6105 bp Feature: domain Description: PP-binding Location: 5919-6105 bp Feature: domain Description: SDR_e1 Location: 6228-7038 bp Feature: domain Description: SDR_e1 Location: 62 2 8-7038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CBM_48 (pfam02922), Fes (COG2382), PRK12316 (peptide synthase; Provisional), A_NRPS_SidN3_like (cd05918), PP-binding (pfam00550), SDR_e1 (cd05235), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)