myRT

myRT report for GCA_902781255.1_Rumen_uncultured_genome_RUG12652

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Seq: CACZIK010000021.1 uncultured Lachnospiraceae bacterium isolate RUG12652 genome assembly, contig: RUG12652_asm_21, whole genome shotgun sequence (53676 bp)
Overview 1 RT 1: 46752-53583 bp Neighborhood of RT #1 [46752, 53648] MalY MET17 RVT-GII RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 46752-47975 bp Feature: domain Description: MalY Location: 46770-47955 bp Feature: domain Description: MalY Location: 46770-47955 bp Feature: gene Location: 48350-49675 bp Feature: domain Description: MET17 Location: 48356-49631 bp Feature: domain Description: MET1 7 Location: 48356-49631 bp Feature: gene Location: 50329-50805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50539-50758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50539-50758 bp Feature: gene Location: 50870-51538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50873-51080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50873-51 080 bp Feature: domain Description: GIIM Note: maturase Location: 51140-51353 bp Feature: domain Description: GIIM Note: maturase Location: 51 1 40-51 353 bp Feature: gene Location: 51844-52242 bp Feature: gene Location: 52338-53648 bp Feature: domain Description: DDE_Tnp_IS66 Location: 53139-53583 bp Feature: domain Description: DDE_Tnp_IS66 Location: 531 39-53583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MalY (COG1168), MET17 (COG2873), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)