myRT

myRT report for GCA_902782115.1_Rumen_uncultured_genome_RUG12735

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Seq: CACZME010000016.1 uncultured Prevotella sp. isolate RUG12735 genome assembly, contig: RUG12735_asm_16, whole genome shotgun sequence (19199 bp)
Overview 1 RT 1: 336-3183 bp Neighborhood of RT #1 [336, 3383] Avd_like RVT-DGRs PDDEXK_2 Feature: gene Location: 336-575 bp Feature: gene Location: 579-929 bp Feature: domain Description: Avd_like Location: 606-912 bp Feature: domain Description: Avd_like Location: 606-91 2 bp Feature: gene Location: 949-2211 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1165-1855 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 65-1 855 bp Feature: gene Location: 2171-2662 bp Feature: gene Location: 2916-3383 bp Feature: domain Description: PDDEXK_2 Location: 2994-3183 bp Feature: domain Description: PDDEXK_2 Location: 2994-31 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), Avd_like (cd16376), RVT-DGRs

Seq: CACZME010000065.1 uncultured Prevotella sp. isolate RUG12735 genome assembly, contig: RUG12735_asm_65, whole genome shotgun sequence (17666 bp)
Overview 1 RT 1: 12131-17467 bp Neighborhood of RT #1 [12131, 17619] OMP_RagA_SusC RVT-GII GIIM Feature: gene Location: 12131-15373 bp Feature: domain Description: OMP_RagA_SusC Location: 12257-15368 bp Feature: domain Description: OMP_RagA_SusC Location: 12 2 57-15368 bp Feature: gene Location: 15986-16198 bp Feature: gene Location: 16276-17619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16627-17245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1662 7-172 45 bp Feature: domain Description: GIIM Note: maturase Location: 17302-17467 bp Feature: domain Description: GIIM Note: maturase Location: 17302 -17467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OMP_RagA_SusC (TIGR04056), RVT-GII, GIIM (pfam08388)