myRT

myRT report for GCA_902782315.1_Rumen_uncultured_genome_RUG12761

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Seq: CACZMT010000001.1 uncultured Lachnospiraceae bacterium isolate RUG12761 genome assembly, contig: RUG12761_asm_1, whole genome shotgun sequence (48879 bp)
Overview 1 RT 1: 16424-22103 bp Neighborhood of RT #1 [16424, 22165] BamA TraG-D_C RVT-GII RVT-GII VirD4 Feature: gene Location: 16424-16951 bp Feature: domain Description: BamA Location: 16478-16751 bp Feature: domain Description: BamA Location: 1 6478-1 6751 bp Feature: gene Location: 17085-18032 bp Feature: domain Description: TraG-D_C Location: 17088-17346 bp Feature: domain Description: TraG-D_C Location: 1 7088-1 7346 bp Feature: gene Location: 18196-19383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18199-18538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 99-1 8538 bp Feature: gene Location: 19386-20147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19737-20121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9737-201 21 bp Feature: gene Location: 20195-20401 bp Feature: gene Location: 20867-22165 bp Feature: domain Description: VirD4 Location: 21080-22103 bp Feature: domain Description: VirD4 Location: 21 080-221 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BamA (COG4775), TraG-D_C (pfam12696), RVT-GII, VirD4 (COG3505)

Seq: CACZMT010000012.1 uncultured Lachnospiraceae bacterium isolate RUG12761 genome assembly, contig: RUG12761_asm_12, whole genome shotgun sequence (26525 bp)
Overview 1 RT 1: 3132-8783 bp Neighborhood of RT #1 [3132, 8783] YebA WYL RVT-GII GIIM PRK00215 Feature: gene Location: 3132-4307 bp Feature: domain Description: YebA Location: 3804-4143 bp Feature: domain Description: YebA Location: 3804-4143 bp Feature: gene Location: 4424-5620 bp Feature: domain Description: WYL Location: 5072-5606 bp Feature: domain Description: WYL Location: 5072 -5606 bp Feature: gene Location: 6135-7529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6450-7065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6450-7065 bp Feature: domain Description: GIIM Note: maturase Location: 7125-7356 bp Feature: domain Description: GIIM Note: maturase Location: 712 5-7356 bp Feature: gene Location: 7680-8291 bp Feature: domain Description: PRK00215 Location: 7710-8283 bp Feature: domain Description: PRK002 15 Location: 7710-82 83 bp Feature: gene Location: 8520-8783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YebA (COG1305), WYL (pfam13280), RVT-GII, GIIM (pfam08388), PRK00215 (transcriptional repressor LexA)