myRT

myRT report for GCA_902782445.1_Rumen_uncultured_genome_RUG12770

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Seq: CACZNC010000004.1 uncultured Ruminococcus sp. isolate RUG12770 genome assembly, contig: RUG12770_asm_4, whole genome shotgun sequence (64766 bp)
Overview 1 RT 1: 54110-59323 bp Neighborhood of RT #1 [54110, 59706] VirD4 RVT-GII Intron_maturas2 HNHc YozG HTH_26 Feature: gene Location: 54110-54580 bp Feature: gene Location: 53955-55730 bp Feature: domain Description: VirD4 Location: 54207-55617 bp Feature: domain Description: VirD4 Location: 54207-5561 7 bp Feature: gene Location: 56448-58280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56727-57555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56727-57555 bp Feature: domain Description: Intron_maturas2 Location: 57690-57933 bp Feature: domain Description: Intron_maturas2 Location: 57690-57933 bp Feature: domain Description: HNHc Note: nucleases Location: 58104-58257 bp Feature: domain Description: HNHc Note: nucleases Location: 581 04-58257 bp Feature: gene Location: 58588-58812 bp Feature: domain Description: YozG Location: 58597-58792 bp Feature: domain Description: YozG Location: 58597-58792 bp Feature: gene Location: 59137-59706 bp Feature: domain Description: HTH_26 Location: 59146-59323 bp Feature: domain Description: HTH_26 Location: 591 46-59323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YozG (COG3655), HTH_26 (pfam13443)

Seq: CACZNC010000058.1 uncultured Ruminococcus sp. isolate RUG12770 genome assembly, contig: RUG12770_asm_58, whole genome shotgun sequence (51362 bp)
Overview 1 RT 1: 48137-51360 bp Neighborhood of RT #1 [48137, 51359] TolB TolB propeller_TolB RVT-GII Feature: gene Location: 48137-49372 bp Feature: gene Location: 49407-50330 bp Feature: domain Description: TolB Location: 49518-49761 bp Feature: domain Description: TolB Location: 49518-49761 bp Feature: domain Description: TolB Location: 49800-50100 bp Feature: domain Description: TolB Location: 49800-50100 bp Feature: domain Description: propeller_TolB Location: 50145-50283 bp Feature: domain Description: propeller_TolB Location: 50145-502 83 bp Feature: gene Location: 50832-51359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51150-51360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51150-51360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TolB (COG0823), propeller_TolB (TIGR02800), RVT-GII

Seq: CACZNC010000100.1 uncultured Ruminococcus sp. isolate RUG12770 genome assembly, contig: RUG12770_asm_100, whole genome shotgun sequence (9371 bp)
Overview 1 RT 1: 192-5280 bp Neighborhood of RT #1 [192, 5280] RVT-UG26 Feature: gene Location: 192-1391 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 387-1005 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3 87-1005 bp Feature: gene Location: 1580-2071 bp Feature: gene Location: 2206-5280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26