myRT

myRT report for GCA_902783045.1_Rumen_uncultured_genome_RUG12828

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Seq: CACZPM010000049.1 uncultured Ruminococcus sp. isolate RUG12828 genome assembly, contig: RUG12828_asm_49, whole genome shotgun sequence (7671 bp)
Overview 1 RT 1: 271-5414 bp Neighborhood of RT #1 [271, 5414] NHLM_micro_ABC1 NHLM_micro_HlyD RVT-UG26 Feature: gene Location: 271-2472 bp Feature: domain Description: NHLM_micro_ABC1 Location: 319-2461 bp Feature: domain Description: NHLM_micro_ABC1 Location: 31 9-2461 bp Feature: gene Location: 2508-2747 bp Feature: domain Description: NHLM_micro_HlyD Location: 2562-2688 bp Feature: domain Description: NHLM_micro_HlyD Location: 2562-2688 bp Feature: gene Location: 2983-4179 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3178-3796 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 31 78-3796 bp Feature: gene Location: 4348-4863 bp Feature: gene Location: 4896-5414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHLM_micro_ABC1 (TIGR03796), NHLM_micro_HlyD (TIGR03794), RVT-UG26

Seq: CACZPM010000211.1 uncultured Ruminococcus sp. isolate RUG12828 genome assembly, contig: RUG12828_asm_211, whole genome shotgun sequence (7590 bp)
Overview 1 RT 1: 466-6983 bp Neighborhood of RT #1 [466, 7006] AAA_21 RVT-UG12 P-type_ATPase_Ca_prok P-type_ATPase_SERCA Feature: gene Location: 466-999 bp Feature: gene Location: 1002-2195 bp Feature: domain Description: AAA_21 Location: 1167-1995 bp Feature: domain Description: AAA_2 1 Location: 1167-1995 bp Feature: gene Location: 2494-3423 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2908-3346 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 908-3346 bp Feature: gene Location: 3480-4280 bp Feature: gene Location: 4346-7006 bp Feature: domain Description: P-type_ATPase_Ca_prok Location: 4409-6560 bp Feature: domain Description: P-type_ATPase_Ca_prok Location: 4409-6560 bp Feature: domain Description: P-type_ATPase_SERCA Location: 6680-6983 bp Feature: domain Description: P-type_ATPase_SERCA Location: 6680-6983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-UG12, P-type_ATPase_Ca_prok (cd02089), P-type_ATPase_SERCA (cd02083)