myRT

myRT report for GCA_902785245.1_Rumen_uncultured_genome_RUG13050

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Seq: CACZXY010000039.1 uncultured Clostridiales bacterium isolate RUG13050 genome assembly, contig: RUG13050_asm_39, whole genome shotgun sequence (26271 bp)
Overview 1 RT 1: 2946-14209 bp Neighborhood of RT #1 [2946, 14331] dnaG DUF3849 COG4646 KOG0390 RVT-GII GIIM YtxK COG4646 TTRAP Feature: gene Location: 2946-4025 bp Feature: domain Description: dnaG Location: 2964-3225 bp Feature: domain Description: dnaG Location: 2964-3225 bp Feature: domain Description: DUF3849 Location: 3543-3921 bp Feature: domain Description: DUF3849 Location: 3543-3921 bp Feature: gene Location: 4025-5986 bp Feature: domain Description: COG4646 Location: 4028-4589 bp Feature: domain Description: COG4646 Location: 4028-4589 bp Feature: domain Description: KOG0390 Location: 4988-5246 bp Feature: domain Description: KOG0390 Location: 4988-5246 bp Feature: gene Location: 6148-8076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6472-7186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6472-71 86 bp Feature: domain Description: GIIM Note: maturase Location: 7300-7501 bp Feature: domain Description: GIIM Note: maturase Location: 7300-7501 bp Feature: gene Location: 8770-13998 bp Feature: domain Description: YtxK Location: 11257-11920 bp Feature: domain Description: YtxK Location: 1 1 257-1 1 920 bp Feature: domain Description: COG4646 Location: 11974-13984 bp Feature: domain Description: COG4646 Location: 1 1 974-1 3984 bp Feature: gene Location: 14020-14331 bp Feature: domain Description: TTRAP Location: 14032-14209 bp Feature: domain Description: TTRAP Location: 1 4032-1 4209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), DUF3849 (pfam12960), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT-GII, GIIM (pfam08388), YtxK (COG0827)

Seq: CACZXY010000078.1 uncultured Clostridiales bacterium isolate RUG13050 genome assembly, contig: RUG13050_asm_78, whole genome shotgun sequence (26612 bp)
Overview 1 RT 1: 5794-9457 bp Neighborhood of RT #1 [5794, 9457] Avd_like RVT-DGRs ChiA1_BD ChiA1_BD Feature: gene Location: 5794-6837 bp Feature: gene Location: 6884-7312 bp Feature: domain Description: Avd_like Location: 6944-7268 bp Feature: domain Description: Avd_like Location: 6944-72 68 bp Feature: gene Location: 7604-8671 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7799-8405 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7799-8405 bp Feature: gene Location: 8637-9116 bp Feature: domain Description: ChiA1_BD Location: 8823-8949 bp Feature: domain Description: ChiA1_BD Location: 882 3-8949 bp Feature: domain Description: ChiA1_BD Location: 9009-9087 bp Feature: domain Description: ChiA1_BD Location: 9009-9087 bp Feature: gene Location: 9296-9457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, ChiA1_BD (cd12214)