myRT

myRT report for GCA_902785255.1_Rumen_uncultured_genome_RUG13053

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Seq: CACZYA010000003.1 uncultured Bacteroidales bacterium isolate RUG13053 genome assembly, contig: RUG13053_asm_3, whole genome shotgun sequence (55096 bp)
Overview 1 RT 1: 4529-10184 bp Neighborhood of RT #1 [4529, 10184] WYL RVT-Retrons Feature: gene Location: 4529-5566 bp Feature: domain Description: WYL Location: 4979-5537 bp Feature: domain Description: WYL Location: 4979-5537 bp Feature: gene Location: 5615-6376 bp Feature: gene Location: 6688-8385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6865-7453 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6865-7453 bp Feature: gene Location: 8420-9592 bp Feature: gene Location: 9636-10184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons

Seq: CACZYA010000005.1 uncultured Bacteroidales bacterium isolate RUG13053 genome assembly, contig: RUG13053_asm_5, whole genome shotgun sequence (77680 bp)
Overview 1 RT 1: 67483-77120 bp Neighborhood of RT #1 [67483, 77134] KOG1803 TIGR00376 Bac_DNA_binding Cas4_I-A_I-B_I-C_I-D_II-B RVT-AbiP2 DEXQc_UvrD UvrD YbjD YbjD Feature: gene Location: 67483-69312 bp Feature: domain Description: KOG1803 Location: 68020-68305 bp Feature: domain Description: KOG1803 Location: 6802 0-68305 bp Feature: domain Description: TIGR00376 Location: 68419-69190 bp Feature: domain Description: TIGR00376 Location: 68419-69190 bp Feature: gene Location: 69322-71127 bp Feature: domain Description: Bac_DNA_binding Location: 69337-69601 bp Feature: domain Description: Bac_DNA_binding Location: 69337-69601 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 70930-71104 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 70930-71104 bp Feature: gene Location: 71177-72781 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 71612-72068 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 71612 -72 068 bp Feature: gene Location: 73386-75212 bp Feature: domain Description: DEXQc_UvrD Location: 73410-74232 bp Feature: domain Description: DEXQc_UvrD Location: 73410-742 32 bp Feature: domain Description: UvrD Location: 74925-75117 bp Feature: domain Description: UvrD Location: 7492 5-75117 bp Feature: gene Location: 75215-77134 bp Feature: domain Description: YbjD Location: 75218-75737 bp Feature: domain Description: YbjD Location: 752 18-75737 bp Feature: domain Description: YbjD Location: 76007-77120 bp Feature: domain Description: YbjD Location: 76007-7712 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1803 (KOG1803, DNA helicase ), TIGR00376 (DNA helicase, putative), Bac_DNA_binding (pfam00216), Cas4_I-A_I-B_I-C_I-D_II-B (cl00641), RVT-AbiP2, DEXQc_UvrD (cd17932), UvrD (COG0210), YbjD (COG3593)